RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SNZ3P43545 298 aa1.26□□□□□ -2.21
MSN5YDR335W LOC1P43586 204 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W SAD1P43589 448 aa1.26□□□□□ -2.21
MSN5YDR335W TOM22P49334 152 aa1.26□□□□□ -2.21
MSN5YDR335W SUN4P53616 420 aa1.26□□□□□ -2.21
MSN5YDR335W SNZ2P53824 298 aa1.26□□□□□ -2.21
MSN5YDR335W STP1Q00947 519 aa1.26□□□□□ -2.21
MSN5YDR335W MRS2Q01926 470 aa1.26□□□□□ -2.21
MSN5YDR335W RPM2Q02773 1202 aa1.26□□□□□ -2.21
MSN5YDR335W SEG1Q04279 960 aa1.26□□□□□ -2.21
MSN5YDR335W YMR087WQ04299 284 aa1.26□□□□□ -2.21
MSN5YDR335W FUS2Q05670 677 aa1.26□□□□□ -2.21
MSN5YDR335W BOP2Q06150 570 aa1.26□□□□□ -2.21
MSN5YDR335W ARR3Q06598 404 aa1.26□□□□□ -2.21
MSN5YDR335W PAM18Q07914 168 aa1.26□□□□□ -2.21
MSN5YDR335W PRP46Q12417 451 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W RPS28AQ3E7X9 67 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W YKL033W-AQ86ZR7 236 aa1.26□□□□□ -2.21
MSN5YDR335W RPP0P05317 312 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W TPK3P05986 398 aa1.26□□□□□ -2.21
MSN5YDR335W TCP1P12612 559 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W SPS100P13130 326 aa1.26□□□□□ -2.21
MSN5YDR335W POL30P15873 258 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W THR4P16120 514 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W RNR3P21672 869 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W CNE1P27825 502 aa1.26□□□□□ -2.21
MSN5YDR335W PTR2P32901 601 aa1.26□□□□□ -2.21
MSN5YDR335W YKL097CP34245 136 aa1.26□□□□□ -2.21
MSN5YDR335W RSM22P36056 628 aa1.26□□□□□ -2.21
MSN5YDR335W OLA1P38219 394 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W SDH8P38345 138 aa1.26□□□□□ -2.21
MSN5YDR335W UTP18P40362 594 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W ATG27P46989 271 aa1.26□□□□□ -2.21
MSN5YDR335W MIG2P53035 382 aa1.26□□□□□ -2.21
MSN5YDR335W YNL234WP53857 426 aa1.26□□□□□ -2.21
MSN5YDR335W NOP13P53883 403 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
MSN5YDR335W YMR160WQ03823 816 aa1.26□□□□□ -2.21
MSN5YDR335W APC4Q04601 652 aa1.26□□□□□ -2.21
MSN5YDR335W NSE1Q07913 336 aa1.26□□□□□ -2.21
MSN5YDR335W YOR387CQ08910 206 aa1.26□□□□□ -2.21
MSN5YDR335W MLH3Q12083 715 aa1.26□□□□□ -2.21
MSN5YDR335W SIR4P11978 1358 aa1.26□□□□□ -2.21
MSN5YDR335W HIS1P00498 297 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W BI2P03873 423 aa1.26□□□□□ -2.21
MSN5YDR335W HIS5P07172 385 aa1.26□□□□□ -2.21
MSN5YDR335W ATP1P07251 545 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W PPR1P07272 904 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W RPL20AP0CX23 172 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W RPL20BP0CX24 172 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W SNF3P10870 884 aa1.26□□□□□ -2.21
MSN5YDR335W ZRC1P20107 442 aa1.26□□□□□ -2.21
MSN5YDR335W RAD57P25301 460 aa1.26□□□□□ -2.21
MSN5YDR335W PUP3P25451 205 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W FUN19P28003 413 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W EFB1P32471 206 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W SPS19P32573 292 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W IES6P32617 166 aa1.26□□□□□ -2.21
MSN5YDR335W ZRT1P32804 376 aa1.26□□□□□ -2.21
MSN5YDR335W PRP18P33411 251 aaPredicted RBP1.26□□□□□ -2.21
MSN5YDR335W HMT1P38074 348 aa1.26□□□□□ -2.21
MSN5YDR335W TAE1P38340 232 aa1.26□□□□□ -2.21
MSN5YDR335W STP2P38704 541 aa1.26□□□□□ -2.21
MSN5YDR335W PCL5P38794 229 aa1.26□□□□□ -2.21
MSN5YDR335W EFM3P47163 339 aa1.26□□□□□ -2.21
MSN5YDR335W MNN10P50108 393 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W SEH1P53011 349 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W ERG26P53199 349 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W VPS62P53285 467 aa1.26□□□□□ -2.21
MSN5YDR335W SAM50P53969 484 aa1.26□□□□□ -2.21
MSN5YDR335W ERG13P54839 491 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W SPR6Q01684 191 aa1.26□□□□□ -2.21
MSN5YDR335W YMR209CQ03648 457 aa1.26□□□□□ -2.21
MSN5YDR335W ENT5Q03769 411 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W HMO1Q03973 246 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W RTT109Q07794 436 aa1.26□□□□□ -2.21
MSN5YDR335W GEP3Q08622 556 aa1.26□□□□□ -2.21
MSN5YDR335W YDL109CQ12103 647 aa1.26□□□□□ -2.21
MSN5YDR335W PKH2Q12236 1081 aaKnown RBP1.26□□□□□ -2.21
MSN5YDR335W PMD1P32634 1753 aa1.25□□□□□ -2.21
MSN5YDR335W HTB1P02293 131 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W HTB2P02294 131 aa1.25□□□□□ -2.21
MSN5YDR335W RPS3P05750 240 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W ZWF1P11412 505 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W MET16P18408 261 aaPredicted RBP1.25□□□□□ -2.21
MSN5YDR335W TKL1P23254 680 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W CDC5P32562 705 aa1.25□□□□□ -2.21
MSN5YDR335W SKN1P33336 771 aa1.25□□□□□ -2.21
MSN5YDR335W ASC1P38011 319 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W LYS12P40495 371 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W INA22P40576 216 aa1.25□□□□□ -2.21
MSN5YDR335W YJL163CP46996 555 aa1.25□□□□□ -2.21
MSN5YDR335W HSH155P49955 971 aaKnown RBP1.25□□□□□ -2.21
MSN5YDR335W YTP1P53584 459 aa1.25□□□□□ -2.21
MSN5YDR335W ERG5P54781 538 aa1.25□□□□□ -2.21
MSN5YDR335W MRPS17Q03246 237 aaPredicted RBP1.25□□□□□ -2.21
MSN5YDR335W ECM11Q04110 302 aa1.25□□□□□ -2.21
MSN5YDR335W UBX2Q04228 584 aa1.25□□□□□ -2.21
MSN5YDR335W GIM5Q04493 163 aa1.25□□□□□ -2.21
MSN5YDR335W RKI1Q12189 258 aa1.25□□□□□ -2.21
MSN5YDR335W LCB4Q12246 624 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms