RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	NOP19	P53317	196 aa	Predicted RBP	5.52	□□□□□ -1.53
SUB2	YDL084W	RHO5	P53879	331 aa	Known RBP	5.52	□□□□□ -1.53
SUB2	YDL084W	LGE1	Q02796	332 aa	Known RBP	5.52	□□□□□ -1.53
SUB2	YDL084W	SDH7	Q04401	133 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	CAB1	Q04430	367 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	APC4	Q04601	652 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	TOS4	Q06266	489 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	YET3	Q07451	203 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.52	□□□□□ -1.53	not detected
SUB2	YDL084W	FEX2	Q08991	375 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	RIM20	Q12033	661 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	SLF1	Q12034	447 aa	Known RBP	5.52	□□□□□ -1.53
SUB2	YDL084W	YPR027C	Q12079	277 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	POM33	Q12164	279 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	WTM1	Q12363	437 aa	Known RBP	5.52	□□□□□ -1.53
SUB2	YDL084W	FMP16	Q12497	93 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	FSH3	Q99369	266 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	STU1	P38198	1513 aa		5.52	□□□□□ -1.53
SUB2	YDL084W	YPT1	P01123	206 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	YBR121C-A	P0C5L4	52 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	IMA3	P0CW40	589 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	IMA4	P0CW41	589 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	SEC12	P11655	471 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	MET16	P18408	261 aa	Predicted RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	MRPL44	P19956	98 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	CCA1	P21269	546 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	IDP1	P21954	428 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	PCL2	P25693	308 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	RGT1	P32862	1170 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	RIB1	P38066	345 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	YPT31	P38555	223 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	EFM1	P38732	585 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	DHH1	P39517	506 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	SSP120	P39931	234 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	PFK26	P40433	827 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	LYS20	P48570	428 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	PMT5	P52867	743 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	PPT1	P53043	513 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	ERG5	P54781	538 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	MTD1	Q02046	320 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	RRP45	Q05636	305 aa	Known RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	RRG8	Q06109	277 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	RAD34	Q06665	692 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	PAM18	Q07914	168 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	IMA2	Q08295	589 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	SYC1	Q08553	188 aa	Predicted RBP	5.51	□□□□□ -1.53
SUB2	YDL084W	TMA16	Q08687	178 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	YOR365C	Q08844	703 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	YPL257W	Q08974	193 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	TRM13	Q12383	476 aa		5.51	□□□□□ -1.53
SUB2	YDL084W	RHO1	P06780	209 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	HIS5	P07172	385 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	ATP1	P07251	545 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	DDI2	P0CH63	225 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	DDI3	P0CH64	225 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	NAM2	P11325	894 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	HEM13	P11353	328 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	RPS1B	P23248	255 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	CDC50	P25656	391 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	CAP1	P28495	268 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
SUB2	YDL084W	HOG1	P32485	435 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	SCM4	P32564	187 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	CBT1	P36038	271 aa	Predicted RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	MRPL4	P36517	319 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	MRPL36	P36531	177 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	ARA1	P38115	344 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	TCM62	P38228	572 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	YBR197C	P38306	217 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	BIG1	P38813	335 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	GPI16	P38875	610 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	NPP2	P39997	493 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	COX15	P40086	486 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	YIL067C	P40514	678 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	SFH5	P47008	294 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	BNA2	P47125	453 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	RRT6	P53117	311 aa	Predicted RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	ERV14	P53173	138 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	COG7	P53195	279 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	OCA2	P53949	197 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	ARG5,6	Q01217	863 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	RPS15	Q01855	142 aa	Known RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	YPS7	Q06325	596 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	THI22	Q06490	572 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	YPR196W	Q06595	470 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	YDL086W	Q07505	273 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	IWR1	Q07532	353 aa	Predicted RBP	5.5	□□□□□ -1.53
SUB2	YDL084W	VCX1	Q99385	411 aa		5.5	□□□□□ -1.53
SUB2	YDL084W	ARG82	P07250	355 aa		5.49	□□□□□ -1.53
SUB2	YDL084W	PUT2	P07275	575 aa		5.49	□□□□□ -1.53
SUB2	YDL084W	RPL19A	P0CX82	189 aa	Known RBP	5.49	□□□□□ -1.53
SUB2	YDL084W	RPL19B	P0CX83	189 aa	Predicted RBP	5.49	□□□□□ -1.53
SUB2	YDL084W	ERD2	P18414	219 aa		5.49	□□□□□ -1.53
SUB2	YDL084W	SLY41	P22215	453 aa		5.49	□□□□□ -1.53
SUB2	YDL084W	SGV1	P23293	657 aa	Known RBP	5.49	□□□□□ -1.53
SUB2	YDL084W	DAL2	P25335	343 aa		5.49	□□□□□ -1.53
SUB2	YDL084W	AHC2	P25649	128 aa		5.49	□□□□□ -1.53
SUB2	YDL084W	RPS5	P26783	225 aa	Known RBP	5.49	□□□□□ -1.53
SUB2	YDL084W	IMP3	P32899	183 aa	Predicted RBP	5.49	□□□□□ -1.53
SUB2	YDL084W	UTP30	P36144	274 aa	Known RBP	5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms