RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ASB14A6NK59 587 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 GAP43P17677 238 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 NMT1P30419 496 aaKnown RBP19.47■□□□□ 0.71
PHGDH-232ENST00000641947 PRKCEQ02156 737 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 NEDD9Q14511 834 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 XKR9Q5GH70 373 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 METTL7BQ6UX53 244 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 LRRC55Q6ZSA7 311 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 VSTM4Q8IW00 320 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 MYCT1Q8N699 235 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 ATP6V0A1Q93050 837 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 PARVGQ9HBI0 331 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 TAB2Q9NYJ8 693 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 MAFBQ9Y5Q3 323 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-232ENST00000641947 LRRC10BA6NIK2 292 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 PRPF6O94906 941 aaKnown RBP19.46■□□□□ 0.71
PHGDH-232ENST00000641947 MAPK4P31152 587 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 KCNA1Q09470 495 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 TAPT1Q6NXT6 567 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 C17orf99Q6UX52 265 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 FILIP1Q7Z7B0 1213 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 MRPL44Q9H9J2 332 aaKnown RBP19.46■□□□□ 0.71
PHGDH-232ENST00000641947 ZMYM2Q9UBW7 1377 aa19.46■□□□□ 0.71
PHGDH-232ENST00000641947 TMEM88BA6NKF7 163 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 COPB1P53618 953 aaKnown RBP19.45■□□□□ 0.7
PHGDH-232ENST00000641947 LRRC63Q05C16 580 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 BMT2Q1RMZ1 405 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 HSDL1Q3SXM5 330 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 CELF3Q5SZQ8 465 aaKnown RBP19.45■□□□□ 0.7
PHGDH-232ENST00000641947 NPLOC4Q8TAT6 608 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 MAML3Q96JK9 1138 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 CNOT6LQ96LI5 555 aaKnown RBP19.45■□□□□ 0.7
PHGDH-232ENST00000641947 IKZF4Q9H2S9 585 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 GPRC5CQ9NQ84 441 aa19.45■□□□□ 0.7
PHGDH-232ENST00000641947 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
PHGDH-232ENST00000641947 GOLGA6L6A8MZA4 724 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 SNAI1O95863 264 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 LRMPQ12912 555 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 ZC2HC1CQ53FD0 456 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 MAMDC4Q6UXC1 1216 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 ZNF467Q7Z7K2 595 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 NOC3LQ8WTT2 800 aaKnown RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 VPS16Q9H269 839 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 ZNF302Q9NR11 478 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 SEPT9Q9UHD8 586 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 TLR2O60603 784 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 GCNT3O95395 438 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 EEF1GP26641 437 aaKnown RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 PBX1P40424 430 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 SPAG1Q07617 926 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 GJC2Q5T442 439 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 CYP4F22Q6NT55 531 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 KCNV1Q6PIU1 500 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 FOXR2Q6PJQ5 311 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 DPP9Q86TI2 863 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 CREBRFQ8IUR6 639 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 KSR1Q8IVT5 923 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 ZNF507Q8TCN5 953 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 CACTINQ8WUQ7 758 aaKnown RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 CCDC102AQ96A19 550 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 GPR20Q99678 358 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-232ENST00000641947 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
PHGDH-232ENST00000641947 TCF7P36402 384 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-232ENST00000641947 SOX10P56693 466 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 GRM1Q13255 1194 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 CRHR2Q13324 411 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 ODR4Q5SWX8 454 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 MORN1Q5T089 497 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 CEP170P1Q96L14 293 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 CCDC43Q96MW1 224 aaKnown RBP19.43■□□□□ 0.7
PHGDH-232ENST00000641947 CTAGE1Q96RT6 745 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 STRA6Q9BX79 667 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 MLXIPQ9HAP2 919 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 PDLIM7Q9NR12 457 aa19.43■□□□□ 0.7
PHGDH-232ENST00000641947 SLC15A5A6NIM6 579 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 PPP1R37O75864 691 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 TXNP10599 105 aaKnown RBP19.42■□□□□ 0.7
PHGDH-232ENST00000641947 INHBEP58166 350 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 ZNF720Q7Z2F6 126 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 ZSCAN30Q86W11 494 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 ZC3H3Q8IXZ2 948 aaKnown RBP19.42■□□□□ 0.7
PHGDH-232ENST00000641947 SCFD2Q8WU76 684 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 XPNPEP1Q9NQW7 623 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 SEL1LQ9UBV2 794 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 DIS3Q9Y2L1 958 aaKnown RBP19.42■□□□□ 0.7
PHGDH-232ENST00000641947 SIP14410 1827 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 ESPNB1AK53 854 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 DKC1O60832 514 aaKnown RBP eCLIP19.42■□□□□ 0.71e-16■■■■■ 39.7
PHGDH-232ENST00000641947 OATP04181 439 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 CTGFP29279 349 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 TM4SF4P48230 202 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 TBX2Q13207 712 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-232ENST00000641947 TTLL4Q14679 1199 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 KNOP1Q1ED39 458 aaKnown RBP19.42■□□□□ 0.7
PHGDH-232ENST00000641947 XKR3Q5GH77 459 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 ARMCX5Q6P1M9 558 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 TRIM50Q86XT4 487 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 FAM178BQ8IXR5 827 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 AFAP1L1Q8TED9 768 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms