RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RAD51AP2Q09MP3 1159 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 CUL4BQ13620 913 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 PLCB4Q15147 1175 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 DYMQ7RTS9 669 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 SH3RF1Q7Z6J0 888 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 RNF180Q86T96 592 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 ATP8B4Q8TF62 1192 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 BBXQ8WY36 941 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-230ENST00000641927 RNPEPQ9H4A4 650 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 MYMKA6NI61 221 aa19.45■□□□□ 0.7
PHGDH-230ENST00000641927 GTPBP6O43824 516 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-230ENST00000641927 MDM2Q00987 491 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-230ENST00000641927 PADI6Q6TGC4 694 aa19.45■□□□□ 0.7
PHGDH-230ENST00000641927 ELOA2Q8IYF1 753 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-230ENST00000641927 RUSC1Q9BVN2 902 aa19.45■□□□□ 0.7
PHGDH-230ENST00000641927 CYP26B1Q9NR63 512 aa19.45■□□□□ 0.7
PHGDH-230ENST00000641927 KPNA6O60684 536 aa19.44■□□□□ 0.7
PHGDH-230ENST00000641927 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
PHGDH-230ENST00000641927 CYP11B2P19099 503 aa19.44■□□□□ 0.7
PHGDH-230ENST00000641927 ASIC1P78348 528 aa19.44■□□□□ 0.7
PHGDH-230ENST00000641927 LHX8Q68G74 356 aa19.44■□□□□ 0.7
PHGDH-230ENST00000641927 DDX12PQ92771 950 aa19.44■□□□□ 0.7
PHGDH-230ENST00000641927 TRIM9Q9C026 710 aa19.44■□□□□ 0.7
PHGDH-230ENST00000641927 NPHP3-ACAD11A0A0J9YXS1 232 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 SMC2O95347 1197 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 F2P00734 622 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 MYL1P05976 194 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 PURAQ00577 322 aaKnown RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 DPYDQ12882 1025 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 KCNA10Q16322 511 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 KIAA0753Q2KHM9 967 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 ZSCAN23Q3MJ62 389 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 RINT1Q6NUQ1 792 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 CXCL17Q6UXB2 119 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 SMARCE1Q969G3 411 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 DEFB118Q96PH6 123 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 C7orf25Q9BPX7 421 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 NIFKQ9BYG3 293 aaKnown RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 SYCE3A1L190 88 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 HBP1O60381 514 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 LETM1O95202 739 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 IDEP14735 1019 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 IGBP1P78318 339 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 NKX3-2P78367 333 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 MFSD10Q14728 455 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 ARSHQ5FYA8 562 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 MAEAQ7L5Y9 396 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 PCSK9Q8NBP7 692 aaKnown RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 KLHDC9Q8NEP7 349 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 KAT2BQ92831 832 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 MTG1Q9BT17 334 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 KATNAL1Q9BW62 490 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 PAK6Q9NQU5 681 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-230ENST00000641927 PRDM10Q9NQV6 1147 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 KIAA1468Q9P260 1216 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 PCDHA5Q9Y5H7 936 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 LOXHD1Q8IVV2 1947 aa19.43■□□□□ 0.7
PHGDH-230ENST00000641927 ASGR1P07306 291 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 CST5P28325 142 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-230ENST00000641927 PSEN2P49810 448 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 POLGP54098 1239 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-230ENST00000641927 LRRC41Q15345 812 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 ARRDC4Q8NCT1 418 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 KCND2Q9NZV8 630 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 BRCA2P51587 3418 aa19.42■□□□□ 0.7
PHGDH-230ENST00000641927 BIN1O00499 593 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 INSRRP14616 1297 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 C1orf186Q6ZWK4 172 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 PPP1R13LQ8WUF5 828 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 TRAPPC12Q8WVT3 735 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 SLC7A3Q8WY07 619 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 ZNF333Q96JL9 665 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 REEP2Q9BRK0 252 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 POLD4Q9HCU8 107 aa19.41■□□□□ 0.7
PHGDH-230ENST00000641927 TBCAO75347 108 aaKnown RBP19.4■□□□□ 0.7
PHGDH-230ENST00000641927 DGAT1O75907 488 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 RPN1P04843 607 aaKnown RBP19.4■□□□□ 0.7
PHGDH-230ENST00000641927 TBC1D8BQ0IIM8 1120 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 PPFIA1Q13136 1202 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 ISM2Q6H9L7 571 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 CCDC47Q96A33 483 aaKnown RBP19.4■□□□□ 0.7
PHGDH-230ENST00000641927 VTI1AQ96AJ9 217 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 ATP6V0A4Q9HBG4 840 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 GIT2Q14161 759 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 TARBP2Q15633 366 aaKnown RBP19.4■□□□□ 0.7
PHGDH-230ENST00000641927 ZNF484Q5JVG2 852 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 CCSAPQ6IQ19 270 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-230ENST00000641927 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 RBM43Q6ZSC3 357 aaKnown RBP19.4■□□□□ 0.7
PHGDH-230ENST00000641927 C7orf31Q8N865 590 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 ARMC5Q96C12 935 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 DNAJC19Q96DA6 116 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 PANK4Q9NVE7 773 aa19.4■□□□□ 0.7
PHGDH-230ENST00000641927 ARID2Q68CP9 1835 aa19.39■□□□□ 0.69
PHGDH-230ENST00000641927 KBTBD13C9JR72 458 aa19.39■□□□□ 0.69
PHGDH-230ENST00000641927 SMIM10L2AP0DMW4 78 aa19.39■□□□□ 0.69
PHGDH-230ENST00000641927 SMIM10L2BP0DMW5 78 aa19.39■□□□□ 0.69
PHGDH-230ENST00000641927 GUCY2CP25092 1073 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms