RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 BEND6Q5SZJ8 279 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-229ENST00000641891 CAGE1Q8TC20 777 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 SLC35C1Q96A29 364 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 ZBTB9Q96C00 473 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 SNX12Q9UMY4 172 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 JRKLQ9Y4A0 524 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 A0A087X0T9 212 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 SLC16A3O15427 465 aaKnown RBP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 NCK2O43639 380 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 FAM228BP0C875 321 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 RPL13P26373 211 aaKnown RBP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 TGFB2P61812 414 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 TUBB4BP68371 445 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 KLHL30Q0D2K2 578 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 MTMR2Q13614 643 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 EXOC3L4Q17RC7 722 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 TBC1D10BQ4KMP7 808 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 KLHDC7AQ5VTJ3 777 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 COG1Q8WTW3 980 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 PSMB7Q99436 277 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 KIAA1683Q9H0B3 1180 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 AIPL1Q9NZN9 384 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 FLOT1O75955 427 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 UCHL3P15374 230 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 ZNF131P52739 623 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 MRPS9P82933 396 aaKnown RBP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 GABPB1Q06547 395 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 ITGB3BPQ13352 177 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-229ENST00000641891 TNIP1Q15025 636 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 MAEAQ7L5Y9 396 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 ZNF720Q7Z2F6 126 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 FAM178BQ8IXR5 827 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 MICALL2Q8IY33 904 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 LPAR1Q92633 364 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 RIT2Q99578 217 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 SLC38A10Q9HBR0 1119 aa18.61■□□□□ 0.57
PHGDH-229ENST00000641891 ARHGEF35A5YM69 484 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 DHX15O43143 795 aaKnown RBP18.6■□□□□ 0.57
PHGDH-229ENST00000641891 HIP1RO75146 1068 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 USP14P54578 494 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 CKAP4Q07065 602 aaKnown RBP18.6■□□□□ 0.57
PHGDH-229ENST00000641891 C2orf54Q08AI8 447 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 TKFCQ3LXA3 575 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 ODR4Q5SWX8 454 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 MIER3Q7Z3K6 550 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 SYTL5Q8TDW5 730 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-229ENST00000641891 HNRNPLLQ8WVV9 542 aaKnown RBP18.6■□□□□ 0.57
PHGDH-229ENST00000641891 BORCS6Q96GS4 357 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 PACSIN1Q9BY11 444 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 SIX2Q9NPC8 291 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 PLCB1Q9NQ66 1216 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 ADAMTS1Q9UHI8 967 aa18.6■□□□□ 0.57
PHGDH-229ENST00000641891 VCAM1P19320 739 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 MUTP22033 750 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 CXCR5P32302 372 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 GMPSP49915 693 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 MAPK7Q13164 816 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 PLS1Q14651 629 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 CREG2Q8IUH2 290 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 DAW1Q8N136 415 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 RBM46Q8TBY0 533 aaKnown RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 WNK4Q96J92 1243 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 ALS2CR12Q96Q35 445 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 TAAR1Q96RJ0 339 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 METTL14Q9HCE5 456 aaKnown RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 AGO4Q9HCK5 861 aaKnown RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 HACL1Q9UJ83 578 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 MYH10P35580 1976 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 CYP2J2P51589 502 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 NBPF12Q5TAG4 269 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 IRF2BP2Q7Z5L9 587 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 UBXN6Q9BZV1 441 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-229ENST00000641891 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 GCNT4Q9P109 453 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 UBIAD1Q9Y5Z9 338 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 GJA3Q9Y6H8 435 aa18.59■□□□□ 0.57
PHGDH-229ENST00000641891 BRCA1P38398 1863 aaKnown RBP18.58■□□□□ 0.57
PHGDH-229ENST00000641891 BCRP11274 1271 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 NAP1L1P55209 391 aaKnown RBP18.58■□□□□ 0.57
PHGDH-229ENST00000641891 PTK2Q05397 1052 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 SPP2Q13103 211 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 DNAAF5Q86Y56 855 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 MCF2L2Q86YR7 1114 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 SPAG5Q96R06 1193 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 SH2D3AQ9BRG2 576 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 EHD2Q9NZN4 543 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 ODF2LQ9ULJ1 636 aa18.58■□□□□ 0.57
PHGDH-229ENST00000641891 MAP2K7O14733 419 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 CTNND1O60716 968 aaKnown RBP18.58■□□□□ 0.56
PHGDH-229ENST00000641891 GUCY2CP25092 1073 aa18.58■□□□□ 0.56
PHGDH-229ENST00000641891 KLRC1P26715 233 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms