RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 FBXO16Q8IX29 292 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 KRI1Q8N9T8 703 aaKnown RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 NEK9Q8TD19 979 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 MORC4Q8TE76 937 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 AFAP1L1Q8TED9 768 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 HAS1Q92839 578 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 GJA10Q969M2 543 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 GPRASP2Q96D09 838 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 CLIC6Q96NY7 704 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 INPP4AQ96PE3 977 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 MTMR9Q96QG7 549 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 WDR11Q9BZH6 1224 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 AGO4Q9HCK5 861 aaKnown RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 PKD2L1Q9P0L9 805 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 PCDHA7Q9UN72 937 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 SRPRBQ9Y5M8 271 aaKnown RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 ABHD14A-ACY1A0A1B0GW23 586 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 VWA3AA6NCI4 1184 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 GOLGA6L4A6NEF3 574 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 TBX3O15119 743 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 CUTAO60888 179 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 EIF3JO75822 258 aaKnown RBP10.56□□□□□ -0.72
PHGDH-228ENST00000641847 RGS20O76081 388 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 GJB5O95377 273 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 TXKP42681 527 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 PTPN11Q06124 597 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-228ENST00000641847 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 IL17AQ16552 155 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 TMEM266Q2M3C6 531 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 DUSP28Q4G0W2 176 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 ARL6IP4Q66PJ3 421 aaKnown RBP10.56□□□□□ -0.72
PHGDH-228ENST00000641847 DTHD1Q6ZMT9 781 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 EEPD1Q7L9B9 569 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 CAGE1Q8TC20 777 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 SLC5A5Q92911 643 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 MRPL38Q96DV4 380 aaKnown RBP10.56□□□□□ -0.72
PHGDH-228ENST00000641847 CDHR1Q96JP9 859 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 ZNF577Q9BSK1 485 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 KCNH7Q9NS40 1196 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 SPTBN4Q9H254 2564 aa10.56□□□□□ -0.72
PHGDH-228ENST00000641847 PTPRZ1P23471 2315 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 MYO15AQ9UKN7 3530 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 GADD45BO75293 160 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 PTMSP20962 102 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 ICAM3P32942 547 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 UBE2HP62256 183 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 PURAQ00577 322 aaKnown RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 IKBKEQ14164 716 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 NBPF20Q3BBV1 942 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 AXDND1Q5T1B0 1012 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 LRCH2Q5VUJ6 765 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 CNKSR3Q6P9H4 555 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 BANK1Q8NDB2 785 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 PBXIP1Q96AQ6 731 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 PABPC5Q96DU9 382 aaKnown RBP10.55□□□□□ -0.72
PHGDH-228ENST00000641847 FAM20AQ96MK3 541 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 SAMD11Q96NU1 681 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 CSRNP2Q9H175 543 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 PDGFCQ9NRA1 345 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 VAV3Q9UKW4 847 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 INSL6Q9Y581 213 aa10.55□□□□□ -0.72
PHGDH-228ENST00000641847 VPS13AQ96RL7 3174 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 DDX39AO00148 427 aaKnown RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 CHMP2AO43633 222 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 GAS7O60861 476 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 SELPP16109 830 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 KCNA2P16389 499 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 UBA1P22314 1058 aaKnown RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 LONP1P36776 959 aaKnown RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 TECP42680 631 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 CHMP4BP1P59074 171 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 PTGISQ16647 500 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 HERC4Q5GLZ8 1057 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 RESP18Q5W5W9 173 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 TAPT1Q6NXT6 567 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 SHC4Q6S5L8 630 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 BMP8AQ7Z5Y6 402 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 SPRED2Q7Z698 418 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 MRPS27Q92552 414 aaKnown RBP10.54□□□□□ -0.72
PHGDH-228ENST00000641847 EDAQ92838 391 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 RIT2Q99578 217 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 SDF4Q9BRK5 362 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 TEKT3Q9BXF9 490 aa10.54□□□□□ -0.72
PHGDH-228ENST00000641847 RAB34Q9BZG1 259 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms