RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ODR4Q5SWX8 454 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 E4F1Q66K89 784 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-216ENST00000641375 MROH8Q9H579 483 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 TXNRD2Q9NNW7 524 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 LARSQ9P2J5 1176 aaKnown RBP18.13■□□□□ 0.49
PHGDH-216ENST00000641375 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 HIP1RO75146 1068 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 RPL13P26373 211 aaKnown RBP18.13■□□□□ 0.49
PHGDH-216ENST00000641375 FXR1P51114 621 aaKnown RBP eCLIP18.13■□□□□ 0.496e-7■■■■□ 19.4
PHGDH-216ENST00000641375 UGCGQ16739 394 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 OTUD6AQ7L8S5 288 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 ZNF720Q7Z2F6 126 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 GBA2Q9HCG7 927 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-216ENST00000641375 POLD4Q9HCU8 107 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 PCDHB13Q9Y5F0 798 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 NR2F2P24468 414 aa18.12■□□□□ 0.49
PHGDH-216ENST00000641375 HOXD13P35453 343 aa18.12■□□□□ 0.49
PHGDH-216ENST00000641375 KCTD2Q14681 263 aa18.12■□□□□ 0.49
PHGDH-216ENST00000641375 C2orf69Q8N8R5 385 aa18.12■□□□□ 0.49
PHGDH-216ENST00000641375 RRAGCQ9HB90 399 aa18.12■□□□□ 0.49
PHGDH-216ENST00000641375 MYH9P35579 1960 aaKnown RBP18.12■□□□□ 0.49
PHGDH-216ENST00000641375 SOWAHBA6NEL2 793 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 MAPTP10636 758 aaKnown RBP18.11■□□□□ 0.49
PHGDH-216ENST00000641375 MAPK7Q13164 816 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 Q3C1V9 767 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 MIS18BP1Q6P0N0 1132 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 SHCBP1Q8NEM2 672 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 DRC1Q96MC2 740 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 C16orf45Q96MC5 204 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-216ENST00000641375 FIZ1Q96SL8 496 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 ABHD10Q9NUJ1 306 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 GABBR1Q9UBS5 961 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 LUC7L2Q9Y383 392 aaKnown RBP18.11■□□□□ 0.49
PHGDH-216ENST00000641375 USP27XA6NNY8 438 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 TGFB3P10600 412 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 TRIM21P19474 475 aaKnown RBP18.11■□□□□ 0.49
PHGDH-216ENST00000641375 NMT1P30419 496 aaKnown RBP18.11■□□□□ 0.49
PHGDH-216ENST00000641375 ACTR2P61160 394 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 ERVK-9P63128 1117 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 ERVK-24P63145 666 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 ALCAMQ13740 583 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 SYCP1Q15431 976 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 FIGNQ5HY92 759 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 TRMT1Q9NXH9 659 aaKnown RBP18.11■□□□□ 0.49
PHGDH-216ENST00000641375 FAM184BQ9ULE4 1060 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 CAPN11Q9UMQ6 739 aa18.11■□□□□ 0.49
PHGDH-216ENST00000641375 ZSCAN12O43309 604 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 USO1O60763 962 aaKnown RBP18.1■□□□□ 0.49
PHGDH-216ENST00000641375 FECHP22830 423 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 KRT9P35527 623 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 NFIL3Q16649 462 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 XKR9Q5GH70 373 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 ABHD15Q6UXT9 468 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 SEPT14Q6ZU15 432 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 DAW1Q8N136 415 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-216ENST00000641375 MMP19Q99542 508 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 ZNFX1Q9P2E3 1918 aaKnown RBP18.1■□□□□ 0.49
PHGDH-216ENST00000641375 LRRC37A2A6NM11 1700 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 DYNC1I1O14576 645 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 PTPN14Q15678 1187 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 TSR1Q2NL82 804 aaKnown RBP18.1■□□□□ 0.49
PHGDH-216ENST00000641375 SWSAP1Q6NVH7 229 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 SLC17A8Q8NDX2 589 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 PCMTD1Q96MG8 357 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-216ENST00000641375 BCAS3Q9H6U6 928 aa18.1■□□□□ 0.49
PHGDH-216ENST00000641375 LOC102724159A0A0B4J2E5 919 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 KIF2AO00139 706 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-216ENST00000641375 BACH1O14867 736 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 PLS3P13797 630 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 CCNA1P78396 465 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 SP2Q02086 613 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 FSTL1Q12841 308 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 NEDD9Q14511 834 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 PWP2Q15269 919 aaKnown RBP18.09■□□□□ 0.49
PHGDH-216ENST00000641375 NYAP1Q6ZVC0 841 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 ANO5Q75V66 913 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 CYFIP1Q7L576 1253 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 FRMD5Q7Z6J6 570 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 TMTC1Q8IUR5 882 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 TRIM59Q8IWR1 403 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.09■□□□□ 0.49
PHGDH-216ENST00000641375 ARID2Q68CP9 1835 aa18.09■□□□□ 0.49
PHGDH-216ENST00000641375 DNAJC25-GNG10A0A024R161 153 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 CCL15-CCL14A0A0B4J2E2 113 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 A0A1W2PQJ5 194 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 PDHXO00330 501 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 NKRFO15226 690 aaKnown RBP eCLIP18.08■□□□□ 0.49
PHGDH-216ENST00000641375 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.49
PHGDH-216ENST00000641375 NR3C1P04150 777 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 SUPT20HL2P0C7V6 817 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 TNNT1P13805 278 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 PPP2R3AQ06190 1150 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 CCL15Q16663 113 aa18.08■□□□□ 0.49
PHGDH-216ENST00000641375 ZC2HC1CQ53FD0 456 aaPredicted RBP18.08■□□□□ 0.49
PHGDH-216ENST00000641375 KCNV1Q6PIU1 500 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms