RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 EPS15P42566 896 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 RAD23BP54727 409 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 KCNJ2P63252 427 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 DHX9Q08211 1270 aaKnown RBP12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 ARMCX6Q7L4S7 300 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 EZH1Q92800 747 aaPredicted RBP12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 OSBPL9Q96SU4 736 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 ZHX3Q9H4I2 956 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 CAPN6Q9Y6Q1 641 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 M0R2N6 131 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 STXBP3O00186 592 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 SHOX2O60902 331 aaPredicted RBP12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 MMEP08473 750 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 PDCD2Q16342 344 aaPredicted RBP12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 PIK3AP1Q6ZUJ8 805 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 FAM228AQ86W67 206 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 TMEM110-MUSTN1A8MSY1 372 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 NLRP5P59047 1200 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 SPAG1Q07617 926 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 CUL3Q13618 768 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 PIDD1Q9HB75 910 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 BATF3Q9NR55 127 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
RBFOX1-224ENST00000641259 TRIM75PA6NK02 468 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 PRELPP51888 382 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 IGBP1P78318 339 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 HEATR3Q7Z4Q2 680 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 SIAH1Q8IUQ4 282 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 RCCD1A6NED2 376 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 ATP2A2P16615 1042 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 NT5C2P49902 561 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 DYDC2Q96IM9 177 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 RMI1Q9H9A7 625 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 TRIM33Q9UPN9 1127 aa12.88□□□□□ -0.35
RBFOX1-224ENST00000641259 RASSF10A6NK89 507 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 GDF11O95390 407 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 XBP1P17861 261 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 TMED1Q13445 227 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 TTBK2Q6IQ55 1244 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 ZC3H18Q86VM9 953 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 PIGSQ96S52 555 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 NFKBIEO00221 500 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 HLA-DOAP06340 250 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 ITFG2Q969R8 447 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 SH3GL2Q99962 352 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 BARHL2Q9NY43 387 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 TTLL1O95922 423 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 SNHG28P0DPA3 235 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 KRT13P13646 458 aa12.87□□□□□ -0.35
RBFOX1-224ENST00000641259 A0A087X0B3 334 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 EGFRP00533 1210 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 ATP4AP20648 1035 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 PTPREP23469 700 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 RFC5P40937 340 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 TNNC1P63316 161 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 GRIK3Q13003 919 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 IL17AQ16552 155 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 MTRQ99707 1265 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 CREB3O43889 395 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 LUC7L3O95232 432 aaKnown RBP12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 STAT6P42226 847 aa12.86□□□□□ -0.35
RBFOX1-224ENST00000641259 MSH2P43246 934 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms