RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CD58P19256 250 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 PPP1R2P3Q6NXS1 205 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 ARMC9Q7Z3E5 817 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 MED10Q9BTT4 135 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 AP1M1Q9BXS5 423 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 CNGA1P29973 690 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 GTF2A1P52655 376 aaPredicted RBP19■□□□□ 0.63
SCARB2-223ENST00000640640 SARNPP82979 210 aaKnown RBP19■□□□□ 0.63
SCARB2-223ENST00000640640 STXBP2Q15833 593 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 GABPB2Q8TAK5 448 aaPredicted RBP19■□□□□ 0.63
SCARB2-223ENST00000640640 SLC16A4O15374 487 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 DHX9Q08211 1270 aaKnown RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 SNX1Q13596 522 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 CCDC13Q8IYE1 715 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 AGXT2Q9BYV1 514 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 RGL1Q9NZL6 768 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 CAPN11Q9UMQ6 739 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 EIF3CLB5ME19 914 aaKnown RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 MRPS25P82663 173 aaKnown RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 PTPAQ15257 358 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 GKAP1Q5VSY0 366 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 DNAJC24Q6P3W2 148 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 NLRP4Q96MN2 994 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 EIF3CQ99613 913 aaKnown RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 FBXO40Q9UH90 709 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 MYOM1P52179 1685 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 ECEL1O95672 775 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 MARK3P27448 753 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 XPOTO43592 962 aaKnown RBP18.99■□□□□ 0.63
SCARB2-223ENST00000640640 KCNJ6P48051 423 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 NACA2Q9H009 215 aa18.99■□□□□ 0.63
SCARB2-223ENST00000640640 ENTPD3O75355 529 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 TTC19Q6DKK2 380 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-223ENST00000640640 PHLDB2Q86SQ0 1253 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 C7orf25Q9BPX7 421 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 I3L4J1 428 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 SFNP31947 248 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 MAP7D1Q3KQU3 841 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 ANKRD20A3Q5VUR7 823 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 RNF10Q8N5U6 811 aaKnown RBP18.98■□□□□ 0.63
SCARB2-223ENST00000640640 H7C0C1 242 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 CCDC188H7C350 402 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 ATP5OP48047 213 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 WDR24Q96S15 920 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 IRX2Q9BZI1 471 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-223ENST00000640640 EDEM3Q9BZQ6 932 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 ATP6V0A4Q9HBG4 840 aa18.98■□□□□ 0.63
SCARB2-223ENST00000640640 EYA4O95677 639 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 LDHAP00338 332 aaKnown RBP18.97■□□□□ 0.63
SCARB2-223ENST00000640640 FGGP02679 453 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 ZNF131P52739 623 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 ATP2A3Q93084 1043 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 NR1I3Q14994 352 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 EPHA7Q15375 998 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 EMBQ6PCB8 327 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 FAM149B1Q96BN6 582 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 NWD1Q149M9 1564 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 DENND3A2RUS2 1198 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 FXR1P51114 621 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCARB2-223ENST00000640640 WHAMMQ8TF30 809 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 STMN2Q93045 179 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 CHP1Q99653 195 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 FDX1P10109 184 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 SMARCA1P28370 1054 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 SURF1Q15526 300 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 GEN1Q17RS7 908 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 TXNRD3Q86VQ6 643 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 THNSL1Q8IYQ7 743 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 ZNRF3Q9ULT6 936 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 NUB1Q9Y5A7 615 aa18.97■□□□□ 0.63
SCARB2-223ENST00000640640 MRPS9P82933 396 aaKnown RBP18.96■□□□□ 0.63
SCARB2-223ENST00000640640 JMJD4Q9H9V9 463 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 GABBR1Q9UBS5 961 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 NFU1Q9UMS0 254 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 SGK1O00141 431 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 PSMC5P62195 406 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 MYMKA6NI61 221 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 ATP11AP98196 1134 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 NSMCE1Q8WV22 266 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 FMO2Q99518 471 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 CLDN3O15551 220 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 GIMAP8Q8ND71 665 aaPredicted RBP18.96■□□□□ 0.63
SCARB2-223ENST00000640640 NLRP7Q8WX94 980 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 KIAA1586Q9HCI6 787 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 KLHL14Q9P2G3 628 aa18.96■□□□□ 0.63
SCARB2-223ENST00000640640 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
SCARB2-223ENST00000640640 ARHGAP23Q9P227 1491 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 PALM3A6NDB9 673 aaPredicted RBP18.95■□□□□ 0.62
SCARB2-223ENST00000640640 CCT5P48643 541 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 DRAP1Q14919 205 aaPredicted RBP18.95■□□□□ 0.62
SCARB2-223ENST00000640640 CC2D1AQ6P1N0 951 aaPredicted RBP18.95■□□□□ 0.62
SCARB2-223ENST00000640640 CCDC62Q6P9F0 684 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 RPS6KC1Q96S38 1066 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 INTS9Q9NV88 658 aaKnown RBP18.95■□□□□ 0.62
SCARB2-223ENST00000640640 PRR12Q9ULL5 1215 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 PDXKO00764 312 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 TRIM49P0CI25 452 aa18.95■□□□□ 0.62
SCARB2-223ENST00000640640 TRIM49CP0CI26 452 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms