RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 COL4A6Q14031 1691 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 NFASCO94856 1347 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 FAM86B1E9PN63 330 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 C5orf67F2Z3F1 127 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 H3BRB1 525 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 FAM86B2P0C5J1 330 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 SMIM10L2AP0DMW4 78 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 SMIM10L2BP0DMW5 78 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 NPY5RQ15761 445 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 BLIDQ8IZY5 108 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 SEPT1Q8WYJ6 367 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 TUT1Q9H6E5 874 aaKnown RBP20.65■□□□□ 0.9
VPS72-207ENST00000640458 AGO4Q9HCK5 861 aaKnown RBP20.65■□□□□ 0.9
VPS72-207ENST00000640458 FAM86C1Q9NVL1 165 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 ORC3Q9UBD5 711 aaPredicted RBP20.65■□□□□ 0.9
VPS72-207ENST00000640458 LIMCH1Q9UPQ0 1083 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 ATG2AQ2TAZ0 1938 aa20.65■□□□□ 0.9
VPS72-207ENST00000640458 IGLV3-22A0A075B6J6 115 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 M0R2N6 131 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 GFRA3O60609 400 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 CIITAP33076 1130 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 NDUFV1P49821 464 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 SP4Q02446 784 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 PLA2G4DQ86XP0 818 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 WASF1Q92558 559 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 APBB2Q92870 758 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 RWDD3Q9Y3V2 267 aa20.64■□□□□ 0.89
VPS72-207ENST00000640458 GSTTP1A0A1W2PQM5 241 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 DTNBO60941 627 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 CAND2O75155 1236 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 FDPSP14324 419 aaKnown RBP20.63■□□□□ 0.89
VPS72-207ENST00000640458 XBP1P17861 261 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 ZXDAP98168 799 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 ADAM15Q13444 863 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 UTP14CQ5TAP6 766 aaKnown RBP20.63■□□□□ 0.89
VPS72-207ENST00000640458 FBXL6Q8N531 539 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
VPS72-207ENST00000640458 SDF4Q9BRK5 362 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 PHF20Q9BVI0 1012 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 JPH1Q9HDC5 661 aaPredicted RBP20.63■□□□□ 0.89
VPS72-207ENST00000640458 KCNJ14Q9UNX9 436 aa20.63■□□□□ 0.89
VPS72-207ENST00000640458 ZFHX2Q9C0A1 2572 aaPredicted RBP20.63■□□□□ 0.89
VPS72-207ENST00000640458 EDIL3O43854 480 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 LINC00271P0C7V0 271 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 HOXC8P31273 242 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 TCF7P36402 384 aaPredicted RBP20.62■□□□□ 0.89
VPS72-207ENST00000640458 USP11P51784 963 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 ST3GAL1Q11201 340 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 ITGB3BPQ13352 177 aaPredicted RBP20.62■□□□□ 0.89
VPS72-207ENST00000640458 ALG13Q9NP73 1137 aaKnown RBP20.62■□□□□ 0.89
VPS72-207ENST00000640458 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 SLC9A2Q9UBY0 812 aa20.62■□□□□ 0.89
VPS72-207ENST00000640458 ZNF215Q9UL58 517 aaPredicted RBP20.62■□□□□ 0.89
VPS72-207ENST00000640458 ADGRA3Q8IWK6 1321 aa20.61■□□□□ 0.89
VPS72-207ENST00000640458 SETQ01105 290 aaPredicted RBP20.61■□□□□ 0.89
VPS72-207ENST00000640458 RABEP1Q15276 862 aa20.61■□□□□ 0.89
VPS72-207ENST00000640458 ZSCAN31Q96LW9 406 aaPredicted RBP20.61■□□□□ 0.89
VPS72-207ENST00000640458 EYA4O95677 639 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 MMP1P03956 469 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 GNAT1P11488 350 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 BTG3Q14201 252 aaPredicted RBP20.6■□□□□ 0.89
VPS72-207ENST00000640458 TRIM50Q86XT4 487 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 TBCKQ8TEA7 893 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 CLP1Q92989 425 aaKnown RBP20.6■□□□□ 0.89
VPS72-207ENST00000640458 MSLNLQ96KJ4 702 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 GJB4Q9NTQ9 266 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 CACNA1HO95180 2353 aa20.6■□□□□ 0.89
VPS72-207ENST00000640458 DHX15O43143 795 aaKnown RBP20.59■□□□□ 0.89
VPS72-207ENST00000640458 JAK2O60674 1132 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 ATG7O95352 703 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 ACTR2P61160 394 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 PRR16Q569H4 304 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 KRT25Q7Z3Z0 450 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 ATOH1Q92858 354 aaPredicted RBP20.59■□□□□ 0.89
VPS72-207ENST00000640458 PPP2R3CQ969Q6 453 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 LENG9Q96B70 501 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 ZNF577Q9BSK1 485 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 SMARCAD1Q9H4L7 1026 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 PLAGL2Q9UPG8 496 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 USP34Q70CQ2 3546 aa20.59■□□□□ 0.89
VPS72-207ENST00000640458 PTPRZ1P23471 2315 aaPredicted RBP20.59■□□□□ 0.89
VPS72-207ENST00000640458 LOC730098B7Z3J9 87 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 IPO5O00410 1097 aaKnown RBP20.58■□□□□ 0.89
VPS72-207ENST00000640458 GHRP10912 638 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 VCPP55072 806 aaKnown RBP20.58■□□□□ 0.89
VPS72-207ENST00000640458 CAMK1Q14012 370 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 NONOQ15233 471 aaKnown RBP eCLIP20.58■□□□□ 0.89
VPS72-207ENST00000640458 FAM26DQ5JW98 314 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 TBC1D32Q96NH3 1257 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 PCYT2Q99447 389 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 LLPHQ9BRT6 129 aaKnown RBP20.58■□□□□ 0.89
VPS72-207ENST00000640458 SH2B1Q9NRF2 756 aaPredicted RBP20.58■□□□□ 0.89
VPS72-207ENST00000640458 TBC1D22BQ9NU19 505 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 ERAP1Q9NZ08 941 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 CLEC1BQ9P126 229 aa20.58■□□□□ 0.89
VPS72-207ENST00000640458 CYP3A7-CYP3A51PA0A087WV96 503 aa20.57■□□□□ 0.88
VPS72-207ENST00000640458 CCNE2O96020 404 aa20.57■□□□□ 0.88
VPS72-207ENST00000640458 CHRNA1P02708 482 aa20.57■□□□□ 0.88
VPS72-207ENST00000640458 CYP3A7P24462 503 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms