RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 DKC1O60832 514 aaKnown RBP eCLIP22.72■■□□□ 1.231e-7■□□□□ 8.2
HLA-B-256ENST00000639848 GHRP10912 638 aa22.72■■□□□ 1.23
HLA-B-256ENST00000639848 DEFB103AP81534 67 aa22.72■■□□□ 1.23
HLA-B-256ENST00000639848 ORC2Q13416 577 aaPredicted RBP22.72■■□□□ 1.23
HLA-B-256ENST00000639848 LPIN1Q14693 890 aa22.72■■□□□ 1.23
HLA-B-256ENST00000639848 TSHZ1Q6ZSZ6 1077 aa22.72■■□□□ 1.23
HLA-B-256ENST00000639848 KIAA0319LQ8IZA0 1049 aa22.72■■□□□ 1.23
HLA-B-256ENST00000639848 CDX2Q99626 313 aaPredicted RBP22.72■■□□□ 1.23
HLA-B-256ENST00000639848 CELF4Q9BZC1 486 aaKnown RBP22.72■■□□□ 1.23
HLA-B-256ENST00000639848 NKX2-4Q9H2Z4 354 aa22.72■■□□□ 1.23
HLA-B-256ENST00000639848 KAT6AQ92794 2004 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 EML1O00423 815 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 GJB5O95377 273 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 AMHP03971 560 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 PSMC5P62195 406 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 SPIRE1Q08AE8 756 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 CALCRLQ16602 461 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 NOSTRINQ8IVI9 506 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 ZNF710Q8N1W2 664 aa22.71■■□□□ 1.23
HLA-B-256ENST00000639848 NIFKQ9BYG3 293 aaKnown RBP22.71■■□□□ 1.23
HLA-B-256ENST00000639848 TLL1O43897 1013 aa22.7■■□□□ 1.22
HLA-B-256ENST00000639848 P4HBP07237 508 aaKnown RBP22.7■■□□□ 1.22
HLA-B-256ENST00000639848 QARSP47897 775 aaKnown RBP22.7■■□□□ 1.22
HLA-B-256ENST00000639848 EPHA7Q15375 998 aa22.7■■□□□ 1.22
HLA-B-256ENST00000639848 TARBP2Q15633 366 aaKnown RBP22.7■■□□□ 1.22
HLA-B-256ENST00000639848 PPP2R2DQ66LE6 453 aa22.7■■□□□ 1.22
HLA-B-256ENST00000639848 TRMT1LQ7Z2T5 733 aaKnown RBP22.7■■□□□ 1.22
HLA-B-256ENST00000639848 PCDHA12Q9UN75 941 aa22.7■■□□□ 1.22
HLA-B-256ENST00000639848 WNT7AO00755 349 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 STBD1O95210 358 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 TMOD1P28289 359 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 TRAPPC10P48553 1259 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 GNL2Q13823 731 aaKnown RBP22.69■■□□□ 1.22
HLA-B-256ENST00000639848 GRIN2CQ14957 1233 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.69■■□□□ 1.221e-7■■□□□ 12
HLA-B-256ENST00000639848 LINC01465Q8N7H1 131 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 RAD9AQ99638 391 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 ZBED2Q9BTP6 218 aa22.69■■□□□ 1.22
HLA-B-256ENST00000639848 CA3P07451 260 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 MYOGP15173 224 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 U2AF2P26368 475 aaKnown RBP eCLIP22.68■■□□□ 1.22
HLA-B-256ENST00000639848 TBC1D8BQ0IIM8 1120 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 TMEM62Q0P6H9 643 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 METTL13Q8N6R0 699 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 BANK1Q8NDB2 785 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 MTMR9Q96QG7 549 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 MAP7D2Q96T17 732 aa22.68■■□□□ 1.22
HLA-B-256ENST00000639848 SEPT9Q9UHD8 586 aaPredicted RBP22.68■■□□□ 1.22
HLA-B-256ENST00000639848 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.68■■□□□ 1.22
HLA-B-256ENST00000639848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.67■■□□□ 1.22
HLA-B-256ENST00000639848 NCAPH2Q6IBW4 605 aa22.67■■□□□ 1.22
HLA-B-256ENST00000639848 EFCAB12Q6NXP0 572 aa22.67■■□□□ 1.22
HLA-B-256ENST00000639848 C4orf19Q8IY42 314 aa22.67■■□□□ 1.22
HLA-B-256ENST00000639848 TOP1MTQ969P6 601 aa22.67■■□□□ 1.22
HLA-B-256ENST00000639848 FTHL17Q9BXU8 183 aa22.67■■□□□ 1.22
HLA-B-256ENST00000639848 TTC12Q9H892 705 aaPredicted RBP22.67■■□□□ 1.22
HLA-B-256ENST00000639848 AGO3Q9H9G7 860 aaKnown RBP22.67■■□□□ 1.22
HLA-B-256ENST00000639848 NOL7Q9UMY1 257 aaKnown RBP22.67■■□□□ 1.22
HLA-B-256ENST00000639848 PPME1Q9Y570 386 aa22.67■■□□□ 1.22
HLA-B-256ENST00000639848 CD52P31358 61 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 MCM7P33993 719 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 CLCN3P51790 818 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 CRYBB1P53674 252 aaPredicted RBP22.66■■□□□ 1.22
HLA-B-256ENST00000639848 ODR4Q5SWX8 454 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 ANO5Q75V66 913 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 MYOCDQ8IZQ8 938 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 NEK9Q8TD19 979 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 MYLIPQ8WY64 445 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 CEP89Q96ST8 783 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 LXNQ9BS40 222 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 PADI3Q9ULW8 664 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 INSL6Q9Y581 213 aa22.66■■□□□ 1.22
HLA-B-256ENST00000639848 IGKV6-21A0A0C4DH24 114 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 DDX11L8A8MPP1 907 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 ATP2B1P20020 1258 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 GJB2P29033 226 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 HTRA4P83105 476 aaPredicted RBP22.65■■□□□ 1.22
HLA-B-256ENST00000639848 PAK2Q13177 524 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 MTERF2Q49AM1 385 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 TMCO2Q7Z6W1 182 aaPredicted RBP22.65■■□□□ 1.22
HLA-B-256ENST00000639848 JPH2Q9BR39 696 aaPredicted RBP22.65■■□□□ 1.22
HLA-B-256ENST00000639848 ZSWIM4Q9H7M6 989 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 SMC3Q9UQE7 1217 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 CHD9Q3L8U1 2897 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 CDH23Q9H251 3354 aa22.65■■□□□ 1.22
HLA-B-256ENST00000639848 MYH9P35579 1960 aaKnown RBP22.64■■□□□ 1.21
HLA-B-256ENST00000639848 GPR32O75388 356 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 VTNP04004 478 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 FOSL2P15408 326 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 TXKP42681 527 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 CDC42EP1Q00587 391 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 TAP1Q03518 808 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 KIZQ2M2Z5 673 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 TTC38Q5R3I4 469 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 EXOC8Q8IYI6 725 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 LRRC71Q8N4P6 559 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 TMEM60Q9H2L4 133 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 AKT3Q9Y243 479 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 GINS2Q9Y248 185 aa22.64■■□□□ 1.21
HLA-B-256ENST00000639848 SIP14410 1827 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms