RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KCNJ6P48051 423 aa15.59■□□□□ 0.09
SCARB2-216ENST00000639300 DRAP1Q14919 205 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-216ENST00000639300 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
SCARB2-216ENST00000639300 WHAMMQ8TF30 809 aa15.59■□□□□ 0.09
SCARB2-216ENST00000639300 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-216ENST00000639300 SGK1O00141 431 aa15.58■□□□□ 0.09
SCARB2-216ENST00000639300 MARK3P27448 753 aa15.58■□□□□ 0.09
SCARB2-216ENST00000639300 PDIA5Q14554 519 aa15.58■□□□□ 0.09
SCARB2-216ENST00000639300 ADGRA1Q86SQ6 560 aa15.58■□□□□ 0.09
SCARB2-216ENST00000639300 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.09
SCARB2-216ENST00000639300 ZNF233A6NK53 670 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 USP11P51784 963 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 RBM43Q6ZSC3 357 aaKnown RBP15.58■□□□□ 0.08
SCARB2-216ENST00000639300 RILPQ96NA2 401 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 RIOK1Q9BRS2 568 aaKnown RBP15.58■□□□□ 0.08
SCARB2-216ENST00000639300 PPP1R12CQ9BZL4 782 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 MAN1A1P33908 653 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 FAM160B1Q5W0V3 765 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 ALS2CLQ60I27 953 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 SPATA4Q8NEY3 305 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 DCPSQ96C86 337 aaKnown RBP15.58■□□□□ 0.08
SCARB2-216ENST00000639300 CDHR1Q96JP9 859 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 DEPDC5O75140 1603 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 CCDC160A6NGH7 325 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 PPP1R3GB7ZBB8 358 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 NDUFB10O96000 172 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 SRGNP10124 158 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 CD44P16070 742 aaKnown RBP15.58■□□□□ 0.08
SCARB2-216ENST00000639300 FGFR2P21802 821 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 PPP1R18Q6NYC8 613 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 NYAP1Q6ZVC0 841 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 RASGRP2Q7LDG7 609 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 MAP3K14Q99558 947 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 MAD1L1Q9Y6D9 718 aa15.58■□□□□ 0.08
SCARB2-216ENST00000639300 KLK7P49862 253 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 GEN1Q17RS7 908 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 FAM47CQ5HY64 1035 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 SCARA5Q6ZMJ2 495 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 NEK9Q8TD19 979 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 PLEKHG2Q9H7P9 1386 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 ARHGEF28Q8N1W1 1705 aaKnown RBP15.57■□□□□ 0.08
SCARB2-216ENST00000639300 LRRD1A4D1F6 860 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 ORC2Q13416 577 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-216ENST00000639300 TAF12Q16514 161 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 CCDC62Q6P9F0 684 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 RNF10Q8N5U6 811 aaKnown RBP15.57■□□□□ 0.08
SCARB2-216ENST00000639300 GIMAP8Q8ND71 665 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-216ENST00000639300 ANAPC5Q9UJX4 755 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 SSX2IPQ9Y2D8 614 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 I3L4J1 428 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 ACSL3O95573 720 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 HOXA7P31268 230 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-216ENST00000639300 YWHAGP61981 247 aaKnown RBP eCLIP15.57■□□□□ 0.08
SCARB2-216ENST00000639300 MIS18BP1Q6P0N0 1132 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 THNSL1Q8IYQ7 743 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 SLC17A8Q8NDX2 589 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 LXNQ9BS40 222 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 CALN1Q9BXU9 219 aa15.57■□□□□ 0.08
SCARB2-216ENST00000639300 CCND2P30279 289 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 RC3H1Q5TC82 1133 aaKnown RBP15.56■□□□□ 0.08
SCARB2-216ENST00000639300 FAM149B1Q96BN6 582 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 HEMGNQ9BXL5 484 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 ANAPC4Q9UJX5 808 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 PLAAQ9Y263 795 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 CCDC188H7C350 402 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 DNAJC24Q6P3W2 148 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 PDXDC1Q6P996 788 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 RTKN2Q8IZC4 609 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 C7orf31Q8N865 590 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 SAAL1Q96ER3 474 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 ZMYND12Q9H0C1 365 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 SCAF8Q9UPN6 1271 aaKnown RBP15.56■□□□□ 0.08
SCARB2-216ENST00000639300 AKT3Q9Y243 479 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 ACTN1P12814 892 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 PPP2R5CQ13362 524 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 MAP7D1Q3KQU3 841 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 RHOT2Q8IXI1 618 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 NLRP4Q96MN2 994 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 C7orf25Q9BPX7 421 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 LRRC1Q9BTT6 524 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 CNOT8Q9UFF9 292 aaKnown RBP15.56■□□□□ 0.08
SCARB2-216ENST00000639300 ANAPC7Q9UJX3 599 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 ZHX2Q9Y6X8 837 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 CAPN9O14815 690 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 PSAPP07602 524 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 C16orf86Q6ZW13 317 aa15.56■□□□□ 0.08
SCARB2-216ENST00000639300 SDCCAG8Q86SQ7 713 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-216ENST00000639300 RASGRF2O14827 1237 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 TROVE2P10155 538 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 GBP1P32455 592 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 CEP55Q53EZ4 464 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 PASD1Q8IV76 773 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 ZNF668Q96K58 619 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 SMARCAL1Q9NZC9 954 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 DENND3A2RUS2 1198 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 HSPA6P17066 643 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms