RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 CELF4Q9BZC1 486 aaKnown RBP13.38□□□□□ -0.27
SPIN3-215ENST00000638873 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
SPIN3-215ENST00000638873 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
SPIN3-215ENST00000638873 NAGPAQ9UK23 515 aa13.38□□□□□ -0.27
SPIN3-215ENST00000638873 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
SPIN3-215ENST00000638873 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 MMEP08473 750 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 MMP10P09238 476 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 CHN1P15882 459 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 PAX7P23759 505 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 TMEM119Q4V9L6 283 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SPDYCQ5MJ68 293 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SYCE1Q8N0S2 351 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 TRIM31Q9BZY9 425 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 RAB17Q9H0T7 212 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SAMD15Q9P1V8 674 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 CAND2O75155 1236 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 KCNH2Q12809 1159 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 ITIH4Q14624 930 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 KCTD19Q17RG1 926 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 TCP11Q8WWU5 503 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SUCLA2Q9P2R7 463 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 ASAP2O43150 1006 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SLC37A4O43826 429 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 PPFIA2O75334 1257 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 SLC8A3P57103 927 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 IRF2BP2Q7Z5L9 587 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 DAAM2Q86T65 1068 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
SPIN3-215ENST00000638873 DNAJC19Q96DA6 116 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 FAXDC2Q96IV6 333 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
SPIN3-215ENST00000638873 CCDC189A1A4V9 331 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 TDP2O95551 362 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 CLTAP09496 248 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 ZBTB48P10074 688 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-215ENST00000638873 ADAM9Q13443 819 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 PPP2R5AQ15172 486 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-215ENST00000638873 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-215ENST00000638873 VPS36Q86VN1 386 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 CCDC65Q8IXS2 484 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 ZNF317Q96PQ6 595 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-215ENST00000638873 LRRC4CQ9HCJ2 640 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 SLC12A4Q9UP95 1085 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 ACTN1P12814 892 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 ACCSLQ4AC99 568 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 TRIM51Q9BSJ1 452 aa13.36□□□□□ -0.27
SPIN3-215ENST00000638873 CFAP73A6NFT4 308 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 CETN3O15182 167 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 HIBADHP31937 336 aaKnown RBP13.35□□□□□ -0.27
SPIN3-215ENST00000638873 SATB1Q01826 763 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 SF3A3Q12874 501 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■■■□□ 16.5
SPIN3-215ENST00000638873 SLFN11Q7Z7L1 901 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 PIGSQ96S52 555 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 TLDC2A0PJX2 215 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
SPIN3-215ENST00000638873 UCHL3P15374 230 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 RIPK1Q13546 671 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 TBC1D1Q86TI0 1168 aaPredicted RBP13.35□□□□□ -0.27
SPIN3-215ENST00000638873 KIRREL3Q8IZU9 778 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 STAMBPL1Q96FJ0 436 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 FGFBP2Q9BYJ0 223 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 HDAC9Q9UKV0 1011 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 AMFRQ9UKV5 643 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 ESYT2A0FGR8 921 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 MARCH6O60337 910 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 UFL1O94874 794 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 FGGP02679 453 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 SLC9A1P19634 815 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 DENND2CQ68D51 928 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 USP17L2Q6R6M4 530 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 NT5DC3Q86UY8 548 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 LRRC34Q8IZ02 419 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
SPIN3-215ENST00000638873 NSRP1Q9H0G5 558 aaKnown RBP13.35□□□□□ -0.27
SPIN3-215ENST00000638873 SCN7AQ01118 1682 aa13.34□□□□□ -0.27
SPIN3-215ENST00000638873 A0A0A6YYK5 440 aaPredicted RBP13.34□□□□□ -0.27
SPIN3-215ENST00000638873 ANXA13P27216 316 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms