RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CLEC17AQ6ZS10 378 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 KCNF1Q9H3M0 494 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 ANAPC7Q9UJX3 599 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 ZBBXA8MT70 800 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 MIF4GDA9UHW6 222 aaKnown RBP19.84■□□□□ 0.77
SCARB2-213ENST00000638680 EEF1DP29692 281 aaKnown RBP19.84■□□□□ 0.77
SCARB2-213ENST00000638680 SNAP25P60880 206 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 OSTNP61366 133 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 MTERF2Q49AM1 385 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 ECT2Q9H8V3 914 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 ATP6V1G3Q96LB4 118 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 SCINQ9Y6U3 715 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 POTEMA6NI47 508 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 PPEF1O14829 653 aaPredicted RBP19.84■□□□□ 0.77
SCARB2-213ENST00000638680 HSPA4LO95757 839 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 SAAL1Q96ER3 474 aa19.84■□□□□ 0.77
SCARB2-213ENST00000638680 SLC4A1P02730 911 aa19.83■□□□□ 0.77
SCARB2-213ENST00000638680 LCA5Q86VQ0 697 aa19.83■□□□□ 0.77
SCARB2-213ENST00000638680 WDR24Q96S15 920 aa19.83■□□□□ 0.77
SCARB2-213ENST00000638680 GRID2IPA4D2P6 1211 aa19.83■□□□□ 0.77
SCARB2-213ENST00000638680 CTIFO43310 598 aaKnown RBP19.83■□□□□ 0.77
SCARB2-213ENST00000638680 PSMA2P25787 234 aa19.83■□□□□ 0.77
SCARB2-213ENST00000638680 NUDCD1Q96RS6 583 aa19.83■□□□□ 0.77
SCARB2-213ENST00000638680 DDX47Q9H0S4 455 aaKnown RBP19.83■□□□□ 0.77
SCARB2-213ENST00000638680 TTC26A0AVF1 554 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 CCND2P30279 289 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 CDK8P49336 464 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 ZNF211Q13398 564 aaPredicted RBP19.83■□□□□ 0.76
SCARB2-213ENST00000638680 SLAIN2Q9P270 581 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 CNOT8Q9UFF9 292 aaKnown RBP19.83■□□□□ 0.76
SCARB2-213ENST00000638680 ARL4CP56559 192 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 FGD4Q96M96 766 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 HEXIM2Q96MH2 286 aaKnown RBP19.83■□□□□ 0.76
SCARB2-213ENST00000638680 FAM167BQ9BTA0 163 aa19.83■□□□□ 0.76
SCARB2-213ENST00000638680 KRT37O76014 449 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 MDM2Q00987 491 aaPredicted RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 SMYD3Q9H7B4 428 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 METP08581 1390 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 CDK12Q9NYV4 1490 aaPredicted RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 GPC5P78333 572 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 ALCAMQ13740 583 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 CDO1Q16878 200 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 ERICH1Q86X53 443 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 PROM2Q8N271 834 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 RAD54LQ92698 747 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 MID2Q9UJV3 735 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 NVLO15381 856 aaKnown RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 PFKFB3Q16875 520 aaPredicted RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 CEP70Q8NHQ1 597 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 TAF1DQ9H5J8 278 aaPredicted RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 GOLGA8MH3BSY2 632 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 KITP10721 976 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 PIGOQ8TEQ8 1089 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 EIF4E1BA6NMX2 242 aaKnown RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 FOXN1O15353 648 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 XPOTO43592 962 aaKnown RBP19.82■□□□□ 0.76
SCARB2-213ENST00000638680 RPS6KC1Q96S38 1066 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 SLC5A4Q9NY91 659 aa19.82■□□□□ 0.76
SCARB2-213ENST00000638680 UNC13AQ9UPW8 1703 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 NR3C1P04150 777 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 ABCD1P33897 745 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 KCNH2Q12809 1159 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 SFR1Q86XK3 245 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 TGS1Q96RS0 853 aaKnown RBP19.81■□□□□ 0.76
SCARB2-213ENST00000638680 MTF1Q14872 753 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 TRIM67Q6ZTA4 783 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 WDR75Q8IWA0 830 aaKnown RBP19.81■□□□□ 0.76
SCARB2-213ENST00000638680 FAM193BQ96PV7 902 aaPredicted RBP19.81■□□□□ 0.76
SCARB2-213ENST00000638680 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCARB2-213ENST00000638680 UPF3AQ9H1J1 476 aaKnown RBP19.81■□□□□ 0.76
SCARB2-213ENST00000638680 YY1AP1Q9H869 796 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 USP6P35125 1406 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 CDC27P30260 824 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 LRRC14Q15048 493 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 EPHA10Q5JZY3 1008 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 FAM83BQ5T0W9 1011 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 C1orf146Q5VVC0 180 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 RSRC2Q7L4I2 434 aaKnown RBP19.81■□□□□ 0.76
SCARB2-213ENST00000638680 BBS5Q8N3I7 341 aa19.81■□□□□ 0.76
SCARB2-213ENST00000638680 VSNL1P62760 191 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 COASYQ13057 564 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 RYBPQ8N488 228 aaPredicted RBP19.8■□□□□ 0.76
SCARB2-213ENST00000638680 COG1Q8WTW3 980 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 NRBF2Q96F24 287 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 STOML1Q9UBI4 398 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 APOBEC2Q9Y235 224 aaKnown RBP19.8■□□□□ 0.76
SCARB2-213ENST00000638680 PEX3P56589 373 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 MB21D2Q8IYB1 491 aaPredicted RBP19.8■□□□□ 0.76
SCARB2-213ENST00000638680 LY9Q9HBG7 655 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 PRDM15P57071 1507 aaPredicted RBP19.8■□□□□ 0.76
SCARB2-213ENST00000638680 OCRLQ01968 901 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 BIRC2Q13490 618 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 SHC4Q6S5L8 630 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 LRRC37BQ96QE4 947 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 BRIP1Q9BX63 1249 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 SLC4A7Q9Y6M7 1214 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 KIF28PB7ZC32 967 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 HAUS5O94927 633 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms