RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 METTL13Q8N6R0 699 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 FAM167AQ96KS9 214 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 SLC9A7Q96T83 725 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
EFHC1-239ENST00000638140 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
EFHC1-239ENST00000638140 NKX2-4Q9H2Z4 354 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 PCDHA11Q9Y5I1 949 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 COL1A2P08123 1366 aa13.69□□□□□ -0.22
EFHC1-239ENST00000638140 KAT6AQ92794 2004 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 CHD9Q3L8U1 2897 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 TMEM150BA6NC51 233 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 M0QZ92 97 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 EFCAB14O75071 495 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 C22orf31O95567 290 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 RPLP2P05387 115 aaKnown RBP13.68□□□□□ -0.22
EFHC1-239ENST00000638140 GJB2P29033 226 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 PSMC5P62195 406 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 ZNF174Q15697 407 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 NCAPH2Q6IBW4 605 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 EFCAB12Q6NXP0 572 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 NOSTRINQ8IVI9 506 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
EFHC1-239ENST00000638140 ZBED2Q9BTP6 218 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 NIFKQ9BYG3 293 aaKnown RBP13.68□□□□□ -0.22
EFHC1-239ENST00000638140 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
EFHC1-239ENST00000638140 AGO3Q9H9G7 860 aaKnown RBP13.68□□□□□ -0.22
EFHC1-239ENST00000638140 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 RGL1Q9NZL6 768 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 CEP131Q9UPN4 1083 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 GINS2Q9Y248 185 aa13.68□□□□□ -0.22
EFHC1-239ENST00000638140 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 MAGEB2O15479 319 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 NEMFO60524 1076 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 VTNP04004 478 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 P4HBP07237 508 aaKnown RBP13.67□□□□□ -0.22
EFHC1-239ENST00000638140 U2AF2P26368 475 aaKnown RBP eCLIP13.67□□□□□ -0.22
EFHC1-239ENST00000638140 QARSP47897 775 aaKnown RBP13.67□□□□□ -0.22
EFHC1-239ENST00000638140 SPIRE1Q08AE8 756 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
EFHC1-239ENST00000638140 EPHA7Q15375 998 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 TARBP2Q15633 366 aaKnown RBP13.67□□□□□ -0.22
EFHC1-239ENST00000638140 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 LRRC71Q8N4P6 559 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 PPP1R16BQ96T49 567 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 WRAP73Q9P2S5 460 aaPredicted RBP13.67□□□□□ -0.22
EFHC1-239ENST00000638140 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 TRPV2Q9Y5S1 764 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 COL6A3P12111 3177 aa13.67□□□□□ -0.22
EFHC1-239ENST00000638140 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
EFHC1-239ENST00000638140 TLL1O43897 1013 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 CA3P07451 260 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 CD52P31358 61 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 CLCN3P51790 818 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 TBC1D8BQ0IIM8 1120 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
EFHC1-239ENST00000638140 KIZQ2M2Z5 673 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 MTERF2Q49AM1 385 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 ANO5Q75V66 913 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 USP38Q8NB14 1042 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 APBB2Q92870 758 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 CEP89Q96ST8 783 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
EFHC1-239ENST00000638140 PADI3Q9ULW8 664 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
EFHC1-239ENST00000638140 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
EFHC1-239ENST00000638140 TANC1Q9C0D5 1861 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 ENPP3O14638 875 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 ZBTB39O15060 712 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 GPR32O75388 356 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 SLITRK3O94933 977 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 UPP2O95045 317 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 GJB5O95377 273 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 AMHP03971 560 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 TMOD1P28289 359 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 TOB1P50616 345 aaPredicted RBP13.65□□□□□ -0.22
EFHC1-239ENST00000638140 NPEPPSP55786 919 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 CYP4A11Q02928 519 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 NBR1Q14596 966 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 TTC38Q5R3I4 469 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 LARP1BQ659C4 914 aaKnown RBP13.65□□□□□ -0.22
EFHC1-239ENST00000638140 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
EFHC1-239ENST00000638140 PLA2G4FQ68DD2 849 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms