RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 CCDC60Q8IWA6 550 aaPredicted RBP13.83□□□□□ -0.2
CACNA1A-250ENST00000637809 CRYGNQ8WXF5 182 aa13.83□□□□□ -0.2
CACNA1A-250ENST00000637809 KCNH6Q9H252 994 aa13.83□□□□□ -0.2
CACNA1A-250ENST00000637809 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
CACNA1A-250ENST00000637809 BARHL2Q9NY43 387 aa13.83□□□□□ -0.2
CACNA1A-250ENST00000637809 NOC2LQ9Y3T9 749 aaKnown RBP13.83□□□□□ -0.2
CACNA1A-250ENST00000637809 USP34Q70CQ2 3546 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 IGLV3-22A0A075B6J6 115 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 SMCO2A6NFE2 343 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 LOC730098B7Z3J9 87 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 ADAMTS3O15072 1205 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 ZBTB43O43298 467 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 NFX1Q12986 1120 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 AP3B2Q13367 1082 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 RBM23Q86U06 439 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 EDAQ92838 391 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 PPP2R3CQ969Q6 453 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 NEK1Q96PY6 1258 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 ADAM2Q99965 735 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 BARX2Q9UMQ3 279 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 GINS2Q9Y248 185 aa13.82□□□□□ -0.2
CACNA1A-250ENST00000637809 C9IYK1 514 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 hCG_1984214I3L0E3 225 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 DDX39AO00148 427 aaKnown RBP13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 BACH1O14867 736 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 RPS6KA5O75582 802 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 C22orf31O95567 290 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 CDC27P30260 824 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 CBX2Q14781 532 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 FAM102BQ5T8I3 360 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 SLC24A5Q71RS6 500 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 DHX32Q7L7V1 743 aaKnown RBP13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF713Q8N859 430 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 VN1R2Q8NFZ6 395 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 C1orf112Q9NSG2 853 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 USP15Q9Y4E8 981 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 PCDHB7Q9Y5E2 793 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 COL1A2P08123 1366 aa13.81□□□□□ -0.2
CACNA1A-250ENST00000637809 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 IPO5O00410 1097 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 PER2O15055 1255 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 GPR32O75388 356 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 CYP3A4P08684 503 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 IBSPP21815 317 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 MRE11P49959 708 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 FAM189BP81408 668 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 RBM10P98175 930 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 UBE3AQ05086 875 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 DSC3Q14574 896 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 KIZQ2M2Z5 673 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 ADCK5Q3MIX3 580 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 TSGA10IPQ3SY00 556 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF484Q5JVG2 852 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 FAM160B1Q5W0V3 765 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 SWSAP1Q6NVH7 229 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 PDXDC2PQ6P474 469 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 FAM228AQ86W67 206 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 PLA2G4DQ86XP0 818 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 GLT8D2Q9H1C3 349 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 TLE6Q9H808 572 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF302Q9NR11 478 aa13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 MAFBQ9Y5Q3 323 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-250ENST00000637809 KLF18A0A0U1RQI7 1052 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 FSCN2O14926 492 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 GPR182O15218 404 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 FGF18O76093 207 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 FGFR1P11362 822 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF76P36508 570 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 CRYBB1P53674 252 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 ERVFC1P60507 584 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 DUSP6Q16828 381 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 JAKMIP3Q5VZ66 844 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 MIS18BP1Q6P0N0 1132 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 BMP8AQ7Z5Y6 402 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 SUSD6Q92537 303 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 PPP1R16BQ96T49 567 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 OSMRQ99650 979 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 CWH43Q9H720 699 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 PCDHB12Q9Y5F1 795 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 ZNF318Q5VUA4 2279 aa13.79□□□□□ -0.2
CACNA1A-250ENST00000637809 TECTAO75443 2155 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms