RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 NOP53Q9NZM5 478 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 TRPC6Q9Y210 931 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 MAD1L1Q9Y6D9 718 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 DYNLT1P63172 113 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 ZNF473Q8WTR7 871 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 GLG1Q92896 1179 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 TPX2Q9ULW0 747 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 SEC24CP53992 1094 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 LRRC14Q15048 493 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 PDCD7Q8N8D1 485 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 GBP7Q8N8V2 638 aaPredicted RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 OR2W6PQ8NHA6 318 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 MIPOL1Q8TD10 442 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 TRIM11Q96F44 468 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 PLEKP08567 350 aaPredicted RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 POLR2BP30876 1174 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 GCLMP48507 274 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 GRAPQ13588 217 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 NAALADL2Q58DX5 795 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 SRRM1Q8IYB3 904 aaKnown RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
CLN5-218ENST00000637397 KMT5AQ9NQR1 393 aa17.11■□□□□ 0.33
CLN5-218ENST00000637397 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
CLN5-218ENST00000637397 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
CLN5-218ENST00000637397 SLC8A3P57103 927 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 C7orf25Q9BPX7 421 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 SLITRK6Q9H5Y7 841 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 H7C0C1 242 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 LSP1P33241 339 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 ATP5OP48047 213 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 CCDC97Q96F63 343 aaPredicted RBP17.1■□□□□ 0.33
CLN5-218ENST00000637397 SPATS2LQ9NUQ6 558 aaKnown RBP17.1■□□□□ 0.33
CLN5-218ENST00000637397 MYMKA6NI61 221 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 BBOX1O75936 387 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 PPP2R5AQ15172 486 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 MCF2L2Q86YR7 1114 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 HEMGNQ9BXL5 484 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 SERPINB2P05120 415 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
CLN5-218ENST00000637397 CORO7P57737 925 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 GPC5P78333 572 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 WDR93Q6P2C0 686 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 TRAPPC11Q7Z392 1133 aa17.1■□□□□ 0.33
CLN5-218ENST00000637397 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 ORC2Q13416 577 aaPredicted RBP17.09■□□□□ 0.33
CLN5-218ENST00000637397 COL9A3Q14050 684 aaPredicted RBP17.09■□□□□ 0.33
CLN5-218ENST00000637397 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 ANAPC7Q9UJX3 599 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 CNTNAP5Q8WYK1 1306 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 KRT1P04264 644 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 MSH2P43246 934 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 STAT2P52630 851 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
CLN5-218ENST00000637397 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 LACRTQ9GZZ8 138 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
CLN5-218ENST00000637397 SASH3O75995 380 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 TMEM191BP0C7N4 346 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 CACNB3P54284 484 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 TROAPQ12815 778 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 BRDTQ58F21 947 aaPredicted RBP17.09■□□□□ 0.33
CLN5-218ENST00000637397 RUBCNQ92622 972 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 ANKZF1Q9H8Y5 726 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 PI4KBQ9UBF8 816 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 H0Y3Z8 333 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 H0YCG3 227 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 TTI1O43156 1089 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 ZNF18P17022 549 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 CNOT8Q9UFF9 292 aaKnown RBP17.09■□□□□ 0.33
CLN5-218ENST00000637397 GJA3Q9Y6H8 435 aa17.09■□□□□ 0.33
CLN5-218ENST00000637397 NOL3O60936 208 aaKnown RBP17.08■□□□□ 0.33
CLN5-218ENST00000637397 FTLP02792 175 aaPredicted RBP17.08■□□□□ 0.33
CLN5-218ENST00000637397 TRIM49P0CI25 452 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 TRIM49CP0CI26 452 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 NTRK3Q16288 839 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 AP1ARQ63HQ0 302 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.33
CLN5-218ENST00000637397 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 FRMPD1Q5SYB0 1578 aa17.08■□□□□ 0.33
CLN5-218ENST00000637397 FAM196BA6NMK8 535 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 RASA4BC9J798 803 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 RASA4O43374 803 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms