RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MYOCDQ8IZQ8 938 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 SEPT1Q8WYJ6 367 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 P2RX5Q93086 422 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 FAM167AQ96KS9 214 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 DRC1Q96MC2 740 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 PARVGQ9HBI0 331 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 SLC39A2Q9NP94 309 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 WDR81Q562E7 1941 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
CLN6-219ENST00000637329 TNPO2O14787 897 aaKnown RBP17■□□□□ 0.31
CLN6-219ENST00000637329 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.319e-7■■■■□ 22.5
CLN6-219ENST00000637329 AP5Z1O43299 807 aa17■□□□□ 0.31
CLN6-219ENST00000637329 CBFA2T2O43439 604 aa17■□□□□ 0.31
CLN6-219ENST00000637329 ZNF862O60290 1169 aa17■□□□□ 0.31
CLN6-219ENST00000637329 LGR5O75473 907 aa17■□□□□ 0.31
CLN6-219ENST00000637329 SLC26A2P50443 739 aa17■□□□□ 0.31
CLN6-219ENST00000637329 ZNF75DP51815 510 aa17■□□□□ 0.31
CLN6-219ENST00000637329 PLCB2Q00722 1185 aa17■□□□□ 0.31
CLN6-219ENST00000637329 SP4Q02446 784 aa17■□□□□ 0.31
CLN6-219ENST00000637329 TPD52L1Q16890 204 aaPredicted RBP17■□□□□ 0.31
CLN6-219ENST00000637329 LY6KQ17RY6 165 aa17■□□□□ 0.31
CLN6-219ENST00000637329 TTI2Q6NXR4 508 aa17■□□□□ 0.31
CLN6-219ENST00000637329 STXBP4Q6ZWJ1 553 aa17■□□□□ 0.31
CLN6-219ENST00000637329 ANO5Q75V66 913 aa17■□□□□ 0.31
CLN6-219ENST00000637329 SFR1Q86XK3 245 aa17■□□□□ 0.31
CLN6-219ENST00000637329 DHX37Q8IY37 1157 aaKnown RBP17■□□□□ 0.31
CLN6-219ENST00000637329 ZIC5Q96T25 663 aa17■□□□□ 0.31
CLN6-219ENST00000637329 TRIM5Q9C035 493 aa17■□□□□ 0.31
CLN6-219ENST00000637329 FANCLQ9NW38 375 aa17■□□□□ 0.31
CLN6-219ENST00000637329 MCM3APO60318 1980 aa17■□□□□ 0.31
CLN6-219ENST00000637329 MGAMO43451 1857 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 GSTTP1A0A1W2PQM5 241 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 NOP56O00567 594 aaKnown RBP16.99■□□□□ 0.31
CLN6-219ENST00000637329 ZBTB39O15060 712 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 EIF3DO15371 548 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLN6-219ENST00000637329 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
CLN6-219ENST00000637329 GH1P01241 217 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 OATP04181 439 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 MAPTP10636 758 aaKnown RBP16.99■□□□□ 0.31
CLN6-219ENST00000637329 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
CLN6-219ENST00000637329 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
CLN6-219ENST00000637329 RAD51AP2Q09MP3 1159 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 ALCAMQ13740 583 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 LAMC2Q13753 1193 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 BMT2Q1RMZ1 405 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 XKR9Q5GH70 373 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 CENPPQ6IPU0 288 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 SLC17A8Q8NDX2 589 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 TRIM47Q96LD4 638 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 GPR20Q99678 358 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 THAP9Q9H5L6 903 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 BCAS3Q9H6U6 928 aa16.99■□□□□ 0.31
CLN6-219ENST00000637329 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
CLN6-219ENST00000637329 DGAT1O75907 488 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 STBD1O95210 358 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 TPM3P06753 285 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 FCGRTP55899 365 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 STX17P56962 302 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 FANCCQ00597 558 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 ARHGAP1Q07960 439 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 MAPK7Q13164 816 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 EPM2AIP1Q7L775 607 aaPredicted RBP16.98■□□□□ 0.31
CLN6-219ENST00000637329 MCPH1Q8NEM0 835 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 HPS3Q969F9 1004 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 SPATA33Q96N06 139 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 CTAGE1Q96RT6 745 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 TSG101Q99816 390 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 ZHX3Q9H4I2 956 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
CLN6-219ENST00000637329 SEPT9Q9UHD8 586 aaPredicted RBP16.98■□□□□ 0.31
CLN6-219ENST00000637329 MAPK8IP1Q9UQF2 711 aa16.98■□□□□ 0.31
CLN6-219ENST00000637329 RSPH10B2B2RC85 870 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 HIP1RO75146 1068 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 RSPH10BP0C881 870 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 EEF1GP26641 437 aaKnown RBP16.97■□□□□ 0.31
CLN6-219ENST00000637329 ACVR2BQ13705 512 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 ZCWPW2Q504Y3 356 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 PLPPR4Q7Z2D5 763 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 FAM114A1Q8IWE2 563 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 DAW1Q8N136 415 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 ANKRD20A12PQ8NF67 263 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 PPTC7Q8NI37 304 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 CEP170P1Q96L14 293 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 PCYT2Q99447 389 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 C17orf75Q9HAS0 396 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 CYP26B1Q9NR63 512 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 PDGFCQ9NRA1 345 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
CLN6-219ENST00000637329 FGFR1OPO95684 399 aaKnown RBP16.96■□□□□ 0.31
CLN6-219ENST00000637329 SERPINC1P01008 464 aa16.96■□□□□ 0.31
CLN6-219ENST00000637329 IGHA2P01877 340 aa16.96■□□□□ 0.31
CLN6-219ENST00000637329 XRCC5P13010 732 aaKnown RBP16.96■□□□□ 0.31
CLN6-219ENST00000637329 ATP1A3P13637 1013 aa16.96■□□□□ 0.31
CLN6-219ENST00000637329 PLS3P13797 630 aa16.96■□□□□ 0.31
CLN6-219ENST00000637329 SCP2P22307 547 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms