RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PALM3A6NDB9 673 aaPredicted RBP20.92■□□□□ 0.94
CLN6-212ENST00000636020 ATP9AO75110 1047 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 WEE2P0C1S8 567 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 NFX1Q12986 1120 aaKnown RBP20.92■□□□□ 0.94
CLN6-212ENST00000636020 PCNX4Q63HM2 1172 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 TICAM2Q86XR7 235 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 PIGSQ96S52 555 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 RGS18Q9NS28 235 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 RNF216Q9NWF9 866 aaPredicted RBP20.92■□□□□ 0.94
CLN6-212ENST00000636020 USTQ9Y2C2 406 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 PCDHA2Q9Y5H9 948 aa20.92■□□□□ 0.94
CLN6-212ENST00000636020 C9IYK1 514 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 XRRA1Q6P2D8 792 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 SLC24A5Q71RS6 500 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 TMC7Q7Z402 723 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 NLRX1Q86UT6 975 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 ADAM2Q99965 735 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 RIOX1Q9H6W3 641 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 ERVK-5Q9HDB9 667 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 C1orf112Q9NSG2 853 aa20.91■□□□□ 0.94
CLN6-212ENST00000636020 KCNA2P16389 499 aa20.9■□□□□ 0.94
CLN6-212ENST00000636020 PDE4AP27815 886 aa20.9■□□□□ 0.94
CLN6-212ENST00000636020 KRT76Q01546 638 aa20.9■□□□□ 0.94
CLN6-212ENST00000636020 MRPL43Q8N983 215 aaKnown RBP20.9■□□□□ 0.94
CLN6-212ENST00000636020 SPTBN2O15020 2390 aa20.89■□□□□ 0.94
CLN6-212ENST00000636020 RARS2Q5T160 578 aaKnown RBP20.89■□□□□ 0.93
CLN6-212ENST00000636020 IFIT1BQ5T764 474 aaKnown RBP20.89■□□□□ 0.93
CLN6-212ENST00000636020 KIAA1841Q6NSI8 718 aa20.89■□□□□ 0.93
CLN6-212ENST00000636020 KCNT2Q6UVM3 1135 aa20.89■□□□□ 0.93
CLN6-212ENST00000636020 NME8Q8N427 588 aa20.89■□□□□ 0.93
CLN6-212ENST00000636020 PCYT2Q99447 389 aa20.89■□□□□ 0.93
CLN6-212ENST00000636020 CYP26B1Q9NR63 512 aa20.89■□□□□ 0.93
CLN6-212ENST00000636020 NOC2LQ9Y3T9 749 aaKnown RBP20.89■□□□□ 0.93
CLN6-212ENST00000636020 R4GN57 208 aa20.89■□□□□ 0.93
CLN6-212ENST00000636020 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 DENND3A2RUS2 1198 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 C2orf71A6NGG8 1288 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 CLASP2O75122 1294 aaKnown RBP20.88■□□□□ 0.93
CLN6-212ENST00000636020 EOMESO95936 686 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 FGFR1P11362 822 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 FAM189BP81408 668 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 KRT17Q04695 432 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 ATAT1Q5SQI0 421 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 LRRC55Q6ZSA7 311 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 C12orf76Q8N812 135 aaPredicted RBP20.88■□□□□ 0.93
CLN6-212ENST00000636020 CYP2W1Q8TAV3 490 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 TRAPPC12Q8WVT3 735 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 GPRASP2Q96D09 838 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 ATP6V0A4Q9HBG4 840 aa20.88■□□□□ 0.93
CLN6-212ENST00000636020 DBR1Q9UK59 544 aaKnown RBP20.88■□□□□ 0.93
CLN6-212ENST00000636020 SMIM35A0A1B0GVV1 85 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 CYTH3O43739 400 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 RPS6KA5O75582 802 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 PPM1AP35813 382 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 TDGQ13569 410 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 SMC1AQ14683 1233 aaKnown RBP20.87■□□□□ 0.93
CLN6-212ENST00000636020 SEC23AQ15436 765 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 KANK3Q6NY19 840 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 SIX5Q8N196 739 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 UBAC1Q9BSL1 405 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 CDHR5Q9HBB8 845 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 TMEM161AQ9NX61 479 aa20.87■□□□□ 0.93
CLN6-212ENST00000636020 PBX3P40426 434 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 RUBCNQ92622 972 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 TNPO1Q92973 898 aaKnown RBP20.86■□□□□ 0.93
CLN6-212ENST00000636020 CDHR1Q96JP9 859 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 ZNF558Q96NG5 402 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 CASD1Q96PB1 797 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 TMEM117Q9H0C3 514 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 ELAC1Q9H777 363 aaKnown RBP20.86■□□□□ 0.93
CLN6-212ENST00000636020 SPG21Q9NZD8 308 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 DUSP12Q9UNI6 340 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 ST3GAL5Q9UNP4 418 aa20.86■□□□□ 0.93
CLN6-212ENST00000636020 MFAP1P55081 439 aaKnown RBP20.85■□□□□ 0.93
CLN6-212ENST00000636020 PLCB4Q15147 1175 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 USP17L6PQ6QN14 398 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 DCLK2Q8N568 766 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 TMEM40Q8WWA1 233 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 KRT23Q9C075 422 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 DZANK1Q9NVP4 752 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 FBXL21Q9UKT6 434 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 LAMA4Q16363 1823 aa20.85■□□□□ 0.93
CLN6-212ENST00000636020 GPR179Q6PRD1 2367 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 ITGB5P18084 799 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 PDE1AP54750 535 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 GRM4Q14833 912 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 ODR4Q5SWX8 454 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 MTHFD1LQ6UB35 978 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 SMARCC2Q8TAQ2 1214 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 ACSF2Q96CM8 615 aaPredicted RBP20.84■□□□□ 0.93
CLN6-212ENST00000636020 HINFPQ9BQA5 517 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 RNF19AQ9NV58 838 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 GINS2Q9Y248 185 aa20.84■□□□□ 0.93
CLN6-212ENST00000636020 PIK3CDO00329 1044 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 MEIS2O14770 477 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 GPR182O15218 404 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 RSPO4Q2I0M5 234 aaPredicted RBP20.83■□□□□ 0.93
CLN6-212ENST00000636020 FEZF2Q8TBJ5 459 aa20.83■□□□□ 0.93
CLN6-212ENST00000636020 RIN2Q8WYP3 895 aaPredicted RBP20.83■□□□□ 0.93
CLN6-212ENST00000636020 AZI2Q9H6S1 392 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms