RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 XIRP1Q702N8 1843 aaKnown RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 THAP12O43422 761 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 GAS2O43903 313 aaKnown RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ZC3H11AO75152 810 aaKnown RBP eCLIP4.96□□□□□ -1.622e-6■□□□□ 9.4
SCN1A-210ENST00000635776 ATP5DP30049 168 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CYP4A11Q02928 519 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF710Q8N1W2 664 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CHST13Q8NET6 341 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 UTP11Q9Y3A2 253 aaKnown RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 FRMPD4Q14CM0 1322 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 KIF4AO95239 1232 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 GTF2H1P32780 548 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 PRKCIP41743 596 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 MXI1P50539 228 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM132AQ24JP5 1023 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 PCNX4Q63HM2 1172 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ARMC9Q7Z3E5 817 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 C4orf19Q8IY42 314 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 C1orf112Q9NSG2 853 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 LAMB2P55268 1798 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 KIAA0754O94854 1291 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 TFDP1Q14186 410 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 NAB2Q15742 525 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ZBTB8OSQ8IWT0 167 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 SLC7A3Q8WY07 619 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 DYDC2Q96IM9 177 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ACAD9Q9H845 621 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CLRN2A0PK11 232 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 MEIS1O00470 390 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 PDE6CP51160 858 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ERVK-24P63145 666 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 NEDD9Q14511 834 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 TRAPPC11Q7Z392 1133 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 SCYL3Q8IZE3 742 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CPXCR1Q8N123 301 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 DEPTORQ8TB45 409 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 AFAP1L1Q8TED9 768 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 REEP2Q9BRK0 252 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 MMTAG2Q9BU76 263 aaKnown RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 GCNT4Q9P109 453 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 STIM2Q9P246 746 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CCDC169A6NNP5 214 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ATP2A1O14983 1001 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SART1O43290 800 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 LCA5LO95447 670 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 EIF3BP55884 814 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 KYAT1Q16773 422 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TCP11Q8WWU5 503 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TEX13BQ9BXU2 312 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SEMA6BQ9H3T3 888 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 CTTNBP2NLQ9P2B4 639 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 NUP98P52948 1817 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RAD17O75943 681 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MYBL1P10243 752 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 GIT2Q14161 759 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 COG2Q14746 738 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 STXBP2Q15833 593 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF677Q86XU0 584 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 GJA10Q969M2 543 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PRMT6Q96LA8 375 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 WDR24Q96S15 920 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SPDYE4A6NLX3 237 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM253P0C7T8 217 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PLS3P13797 630 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 LMNB2Q03252 620 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PTK2Q05397 1052 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 IL17AQ16552 155 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 XKR3Q5GH77 459 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 KIAA0895Q8NCT3 520 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SMCR8Q8TEV9 937 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RFFLQ8WZ73 363 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 DNAJC19Q96DA6 116 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 NCAPGQ9BPX3 1015 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 LXNQ9BS40 222 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 WDR18Q9BV38 432 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ST6GALNAC4Q9H4F1 302 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SHANK3Q9BYB0 1731 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ITGB4P16144 1822 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PPFIA4O75335 1185 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MYCLP12524 364 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 OAS2P29728 719 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MATR3P43243 847 aaKnown RBP eCLIP4.95□□□□□ -1.621e-10■■■■■ 37.8
SCN1A-210ENST00000635776 CCNA1P78396 465 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RASSF7Q02833 373 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 IFFO1Q0D2I5 559 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TRIM72Q6ZMU5 477 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 CCHCR1Q8TD31 782 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 HAS1Q92839 578 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MYOZ2Q9NPC6 264 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 LOC102724159A0A0B4J2E5 919 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 POTEFA5A3E0 1075 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PHACTR2O75167 634 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 POTEIP0CG38 1075 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RFC5P40937 340 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PWP2Q15269 919 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 GRIK5Q16478 980 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 WDR78Q5VTH9 848 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 KRT39Q6A163 491 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 POTEGQ6S5H5 508 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms