RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 USP17L1Q7RTZ2 530 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 OOSP2Q86WS3 158 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TEX2Q8IWB9 1127 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 YY1AP1Q9H869 796 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 UBE2TQ9NPD8 197 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 SERTAD1Q9UHV2 236 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 LSM7Q9UK45 103 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PCDHA5Q9Y5H7 936 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF518AQ6AHZ1 1483 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TARSL2A2RTX5 802 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TBC1D12O60347 775 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 CD58P19256 250 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 CARSP49589 748 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ATP1A2P50993 1020 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 NCKAP1LP55160 1127 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ACTR5Q9H9F9 607 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 CYP26B1Q9NR63 512 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 GEMIN8Q9NWZ8 242 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 HOXC10Q9NYD6 342 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 GCNT4Q9P109 453 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PI4KBQ9UBF8 816 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ARHGAP26Q9UNA1 814 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 MAP2K2P36507 400 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ADKP55263 362 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 COPS2P61201 443 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 E2F5Q15329 346 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 C16orf87Q6PH81 154 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PODNQ7Z5L7 613 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 IFNL3Q8IZI9 196 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ZBTB38Q8NAP3 1195 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TSEN34Q9BSV6 310 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 FAM96AQ9H5X1 160 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 RUBCNLQ9H714 662 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 POLE3Q9NRF9 147 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 EHD2Q9NZN4 543 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 H2AFY2Q9P0M6 372 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 YEATS2Q9ULM3 1422 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 EXOC1LA0A1B0GW35 172 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 LRRC53A6NM62 1247 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 LRRN2O75325 713 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 GFAPP14136 432 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TRPC1P48995 793 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 NEK2P51955 445 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TMED1Q13445 227 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 EFTUD2Q15029 972 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PPP6R3Q5H9R7 873 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 SCARA5Q6ZMJ2 495 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TRIML2Q8N7C3 387 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 GTSE1Q9NYZ3 720 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 H0YC42 278 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 FBLN1P23142 703 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 UBXN2AP68543 259 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 RASSF7Q02833 373 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 SEPT2Q15019 361 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CDC37Q16543 378 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CYP4F22Q6NT55 531 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 PDIK1LQ8N165 341 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 SDR42E1Q8WUS8 393 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CBX8Q9HC52 389 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 A2MP01023 1474 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 hCG_1984214I3L0E3 225 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ZW10O43264 779 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TRAPPC3O43617 180 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 RALBP11234 206 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CPB1P15086 417 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 NAA35Q5VZE5 725 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ANKS6Q68DC2 871 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CIAPIN1Q6FI81 312 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GRAMD4Q6IC98 578 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TAS2R42Q7RTR8 314 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TRMT44Q8IYL2 757 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 KLHL29Q96CT2 875 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 HES6Q96HZ4 224 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 PBKQ96KB5 322 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CALR3Q96L12 384 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TRPC7Q9HCX4 862 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ASNSD1Q9NWL6 643 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GOLGA8TH3BQL2 631 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 NDUFB5O43674 189 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 DYRK3O43781 588 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GOLGA8HP0CJ92 632 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 JAK3P52333 1124 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 PRAMEP78395 509 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TTLL4Q14679 1199 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TCP11X2Q5H9J9 407 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF667Q5HYK9 610 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 PLEKHM2Q8IWE5 1019 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TRIM48Q8IWZ4 208 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 UHMK1Q8TAS1 419 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF274Q96GC6 653 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 CNOT6LQ96LI5 555 aaKnown RBP5.93□□□□□ -1.46
SCN1A-209ENST00000635750 EYA1Q99502 592 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 TMEM161AQ9NX61 479 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GOLGA8IPA6NC78 632 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 MAPK13O15264 365 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 BBOX1O75936 387 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 HPCAP84074 193 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 GUCY2DQ02846 1103 aa5.93□□□□□ -1.46
SCN1A-209ENST00000635750 EHHADHQ08426 723 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms