RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 CHMP2AO43633 222 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 TMOD1P28289 359 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 TMEM62Q0P6H9 643 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 PAK2Q13177 524 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 MIER3Q7Z3K6 550 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 ETNPPLQ8TBG4 499 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 MTCH2Q9Y6C9 303 aa20.6■□□□□ 0.89
CLN6-210ENST00000635747 RFXAPO00287 272 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 C22orf31O95567 290 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 OATP04181 439 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 FDPSP14324 419 aaKnown RBP20.59■□□□□ 0.89
CLN6-210ENST00000635747 CD52P31358 61 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 KRT2P35908 639 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 TRIM29Q14134 588 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 CCDC85BQ15834 202 aaPredicted RBP20.59■□□□□ 0.89
CLN6-210ENST00000635747 PIK3AP1Q6ZUJ8 805 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 TRMT1LQ7Z2T5 733 aaKnown RBP20.59■□□□□ 0.89
CLN6-210ENST00000635747 METTL13Q8N6R0 699 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 NSUN7Q8NE18 718 aaKnown RBP20.59■□□□□ 0.89
CLN6-210ENST00000635747 AGO3Q9H9G7 860 aaKnown RBP20.59■□□□□ 0.89
CLN6-210ENST00000635747 PADI3Q9ULW8 664 aa20.59■□□□□ 0.89
CLN6-210ENST00000635747 EPOPA6NHQ4 379 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 TBX3O15119 743 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 LARGE1O95461 756 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 PRKCEQ02156 737 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 GRB10Q13322 594 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 B3GNT9Q6UX72 402 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 MICALL1Q8N3F8 863 aa20.58■□□□□ 0.89
CLN6-210ENST00000635747 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
CLN6-210ENST00000635747 PTPRSQ13332 1948 aa20.58■□□□□ 0.88
CLN6-210ENST00000635747 ZNF862O60290 1169 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 MARCH6O60337 910 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 CCNT1O60563 726 aaKnown RBP20.57■□□□□ 0.88
CLN6-210ENST00000635747 DKC1O60832 514 aaKnown RBP eCLIP20.57■□□□□ 0.88
CLN6-210ENST00000635747 CRYBB1P53674 252 aaPredicted RBP20.57■□□□□ 0.88
CLN6-210ENST00000635747 C8orf34Q49A92 452 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 OXER1Q8TDS5 423 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
CLN6-210ENST00000635747 SYMPKQ92797 1274 aaKnown RBP20.57■□□□□ 0.88
CLN6-210ENST00000635747 ZSCAN31Q96LW9 406 aaPredicted RBP20.57■□□□□ 0.88
CLN6-210ENST00000635747 MAP7D2Q96T17 732 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 SUGCTQ9HAC7 445 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 KCNMB3Q9NPA1 279 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 GJB4Q9NTQ9 266 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 THEGQ9P2T0 379 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 GINS2Q9Y248 185 aa20.57■□□□□ 0.88
CLN6-210ENST00000635747 GPR182O15218 404 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 RPS6KA5O75582 802 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
CLN6-210ENST00000635747 XKR3Q5GH77 459 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 EFCAB12Q6NXP0 572 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 FBXO22Q8NEZ5 403 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 GJA10Q969M2 543 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 MTUS1Q9ULD2 1270 aa20.56■□□□□ 0.88
CLN6-210ENST00000635747 MYH9P35579 1960 aaKnown RBP20.55■□□□□ 0.88
CLN6-210ENST00000635747 REV3LO60673 3130 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 SLC37A4O43826 429 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 MMP1P03956 469 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 STAG3L1P0CL83 205 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 CDC42EP1Q00587 391 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 TBC1D8BQ0IIM8 1120 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
CLN6-210ENST00000635747 PPP2R5CQ13362 524 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 UGCGQ16739 394 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 SLFN12Q8IYM2 578 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 FIBCD1Q8N539 461 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 IL27Q8NEV9 243 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 LLPHQ9BRT6 129 aaKnown RBP20.55■□□□□ 0.88
CLN6-210ENST00000635747 NIFKQ9BYG3 293 aaKnown RBP20.55■□□□□ 0.88
CLN6-210ENST00000635747 SH2B1Q9NRF2 756 aaPredicted RBP20.55■□□□□ 0.88
CLN6-210ENST00000635747 RWDD3Q9Y3V2 267 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 VCANP13611 3396 aa20.55■□□□□ 0.88
CLN6-210ENST00000635747 LPXNO60711 386 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 PSMC5P62195 406 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 NR5A1Q13285 461 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 KIZQ2M2Z5 673 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 EPC2Q52LR7 807 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 TJAP1Q5JTD0 557 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 NPAS4Q8IUM7 802 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 C17orf80Q9BSJ5 609 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 ERVK-5Q9HDB9 667 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 AKT3Q9Y243 479 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 COL4A6Q14031 1691 aa20.54■□□□□ 0.88
CLN6-210ENST00000635747 JAK2O60674 1132 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 DTNBO60941 627 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 GPR32O75388 356 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 VTNP04004 478 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 DNM2P50570 870 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 CLCN3P51790 818 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 MRPS5P82675 430 aaKnown RBP20.53■□□□□ 0.88
CLN6-210ENST00000635747 SAFBQ15424 915 aaKnown RBP eCLIP20.53■□□□□ 0.88
CLN6-210ENST00000635747 SKIV2LQ15477 1246 aaKnown RBP20.53■□□□□ 0.88
CLN6-210ENST00000635747 TARBP2Q15633 366 aaKnown RBP20.53■□□□□ 0.88
CLN6-210ENST00000635747 PTPROQ16827 1216 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 AAK1Q2M2I8 961 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 KRT40Q6A162 431 aa20.53■□□□□ 0.88
CLN6-210ENST00000635747 RTN4RL1Q86UN2 441 aaPredicted RBP20.53■□□□□ 0.88
CLN6-210ENST00000635747 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms