RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 PLPPR4Q7Z2D5 763 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 FAM184AQ8NB25 1140 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 APBB2Q92870 758 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 GJA10Q969M2 543 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 YME1L1Q96TA2 773 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 RC3H2Q9HBD1 1191 aaKnown RBP17.6■□□□□ 0.41
LINC00339-209ENST00000635450 TBC1D22BQ9NU19 505 aa17.6■□□□□ 0.41
LINC00339-209ENST00000635450 FNDC1Q4ZHG4 1894 aaPredicted RBP17.59■□□□□ 0.41
LINC00339-209ENST00000635450 BACH1O14867 736 aa17.59■□□□□ 0.41
LINC00339-209ENST00000635450 LINC00271P0C7V0 271 aa17.59■□□□□ 0.41
LINC00339-209ENST00000635450 FOSBP53539 338 aa17.59■□□□□ 0.41
LINC00339-209ENST00000635450 INF2Q27J81 1249 aa17.59■□□□□ 0.41
LINC00339-209ENST00000635450 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
LINC00339-209ENST00000635450 RRN3P2A6NIE6 340 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 SAFBQ15424 915 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC00339-209ENST00000635450 MTHFD1LQ6UB35 978 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 TSHZ1Q6ZSZ6 1077 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 PIK3AP1Q6ZUJ8 805 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 TRMT1LQ7Z2T5 733 aaKnown RBP17.58■□□□□ 0.4
LINC00339-209ENST00000635450 NEK8Q86SG6 692 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 ATP8B4Q8TF62 1192 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
LINC00339-209ENST00000635450 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
LINC00339-209ENST00000635450 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 ZNF302Q9NR11 478 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 PCDHA2Q9Y5H9 948 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 TRPV2Q9Y5S1 764 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 PLXNA4Q9HCM2 1894 aa17.58■□□□□ 0.4
LINC00339-209ENST00000635450 MMP1P03956 469 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 BMP1P13497 986 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 KRT76Q01546 638 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 TMEM266Q2M3C6 531 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 LETM2Q2VYF4 491 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 Q4G0T1 1027 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 EPC2Q52LR7 807 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 SWSAP1Q6NVH7 229 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 PDXDC2PQ6P474 469 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 RTN4RL1Q86UN2 441 aaPredicted RBP17.57■□□□□ 0.4
LINC00339-209ENST00000635450 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 C8orf76Q96K31 380 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 NAP1L4Q99733 375 aaKnown RBP17.57■□□□□ 0.4
LINC00339-209ENST00000635450 CDHR5Q9HBB8 845 aa17.57■□□□□ 0.4
LINC00339-209ENST00000635450 IGSF9BQ9UPX0 1349 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 CYP3A7-CYP3A51PA0A087WV96 503 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 ENPP3O14638 875 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 MSH4O15457 936 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 GAS7O60861 476 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 TDP2O95551 362 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 CYP3A7P24462 503 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 NR5A1Q13285 461 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 UGCGQ16739 394 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 FAM160B1Q5W0V3 765 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 ZNF746Q6NUN9 644 aaPredicted RBP17.56■□□□□ 0.4
LINC00339-209ENST00000635450 MIS18BP1Q6P0N0 1132 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 DIS3L2Q8IYB7 885 aaKnown RBP17.56■□□□□ 0.4
LINC00339-209ENST00000635450 TMEM40Q8WWA1 233 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
LINC00339-209ENST00000635450 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 PADI3Q9ULW8 664 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 SAMM50Q9Y512 469 aa17.56■□□□□ 0.4
LINC00339-209ENST00000635450 ADGRA3Q8IWK6 1321 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 SMIM35A0A1B0GVV1 85 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 CCNT1O60563 726 aaKnown RBP17.55■□□□□ 0.4
LINC00339-209ENST00000635450 C22orf31O95567 290 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 GCFC2P16383 781 aaKnown RBP17.55■□□□□ 0.4
LINC00339-209ENST00000635450 KLRC1P26715 233 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 GATMP50440 423 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 LRCH2Q5VUJ6 765 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 TMEM192Q8IY95 271 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 SMAP1Q8IYB5 467 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-209ENST00000635450 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 TMX3Q96JJ7 454 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 RIT2Q99578 217 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 CELF4Q9BZC1 486 aaKnown RBP17.55■□□□□ 0.4
LINC00339-209ENST00000635450 TSPYL2Q9H2G4 693 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-209ENST00000635450 DDX25Q9UHL0 483 aaKnown RBP17.55■□□□□ 0.4
LINC00339-209ENST00000635450 GINS2Q9Y248 185 aa17.55■□□□□ 0.4
LINC00339-209ENST00000635450 COL1A2P08123 1366 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 BTBD18B2RXH4 712 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 TNFRSF10AO00220 468 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 CHMP2AO43633 222 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 ZNF862O60290 1169 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 HBP1O60381 514 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 MGEA5O60502 916 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 PSAPP07602 524 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 SLC26A2P50443 739 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 IER5Q5VY09 327 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 PPP4R3AQ6IN85 833 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 CRIPAKQ8N1N5 446 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 SLC5A5Q92911 643 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 MBOAT7Q96N66 472 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 PCDHA10Q9Y5I2 948 aa17.54■□□□□ 0.4
LINC00339-209ENST00000635450 MAFBQ9Y5Q3 323 aaPredicted RBP17.54■□□□□ 0.4
LINC00339-209ENST00000635450 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms