RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
SRSF4-208ENST00000634348 MCM8Q9UJA3 840 aa12.14□□□□□ -0.47
SRSF4-208ENST00000634348 PCDHGA3Q9Y5H0 932 aa12.14□□□□□ -0.47
SRSF4-208ENST00000634348 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 ARMCX4Q5H9R4 360 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 CDC26Q8NHZ8 85 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 MTRQ99707 1265 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 MRPS25P82663 173 aaKnown RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 DAB2IPQ5VWQ8 1189 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 NAIF1Q69YI7 327 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 CYP4F22Q6NT55 531 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 TNIP2Q8NFZ5 429 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 PIGUQ9H490 435 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 LRRN2O75325 713 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 SLCO1A2P46721 670 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 GYG1P46976 350 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 CLCN6P51797 869 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 TP53BP2Q13625 1128 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 TRIP4Q15650 581 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 CALML6Q8TD86 181 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 TRAPPC10P48553 1259 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 PPP1R13BQ96KQ4 1090 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 USE1Q9NZ43 259 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 UBN2Q6ZU65 1347 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 MYOCDQ8IZQ8 938 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 ABCD1P33897 745 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 SOX6P35712 828 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 FBXW4P57775 412 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 EFTUD2Q15029 972 aaKnown RBP eCLIP12.13□□□□□ -0.471e-8■■□□□ 13.2
SRSF4-208ENST00000634348 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 TTC25Q96NG3 672 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
SRSF4-208ENST00000634348 MAGI1Q96QZ7 1491 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-208ENST00000634348 CAND2O75155 1236 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 BCAP31P51572 246 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PARVAQ9NVD7 372 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 GMNCA6NCL1 334 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 HOXC9P31274 260 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PTH1RQ03431 593 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 H0YIN7 160 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 TOM1O60784 492 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 BAIAP3O94812 1187 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 POLA2Q14181 598 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 TERB1Q8NA31 727 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 MAML3Q96JK9 1138 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 CCT7Q99832 543 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 ITGAXP20702 1163 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 B3GALT6Q96L58 329 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PSTPIP2Q9H939 334 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 ETNK1Q9HBU6 452 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 USP19O94966 1318 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 STX7O15400 261 aaKnown RBP12.12□□□□□ -0.47
SRSF4-208ENST00000634348 BNIP3LO60238 219 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 LCA5LO95447 670 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 PLS3P13797 630 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 NDUFA8P51970 172 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 MECOMQ03112 1051 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 MFSD14BQ5SR56 506 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
SRSF4-208ENST00000634348 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 LSM1O15116 133 aaKnown RBP12.11□□□□□ -0.47
SRSF4-208ENST00000634348 LONP2Q86WA8 852 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 FMO2Q99518 471 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 HSPA4LO95757 839 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 S100A1P23297 94 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 TRIP13Q15645 432 aaPredicted RBP12.11□□□□□ -0.47
SRSF4-208ENST00000634348 DNAJC10Q8IXB1 793 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 OTUB1Q96FW1 271 aaPredicted RBP12.11□□□□□ -0.47
SRSF4-208ENST00000634348 VIPAS39Q9H9C1 493 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 TUFT1Q9NNX1 390 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 CLIC4Q9Y696 253 aa12.11□□□□□ -0.47
SRSF4-208ENST00000634348 GJA8P48165 433 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms