RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 LSM12Q3MHD2 195 aaKnown RBP4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 USP39Q53GS9 565 aaKnown RBP4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 CALML6Q8TD86 181 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NEU4Q8WWR8 484 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 E2F7Q96AV8 911 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 WNK4Q96J92 1243 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 CD244Q9BZW8 370 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 OSBPL2Q9H1P3 480 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SLC52A2Q9HAB3 445 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 INCENPQ9NQS7 918 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 KCNH7Q9NS40 1196 aa4.39□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 HIP1RO75146 1068 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 CNOT4O95628 575 aaKnown RBP4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FNTBP49356 437 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 DGCR2P98153 550 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NFYCQ13952 458 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 OTOP1Q7RTM1 612 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NOSTRINQ8IVI9 506 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 STPG3Q8N7X2 389 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 EXTL1Q92935 676 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 LPPQ93052 612 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 ADOQ96SZ5 270 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 ZDHHC5Q9C0B5 715 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SMURF1Q9HCE7 757 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NDOR1Q9UHB4 597 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SLC12A8A0AV02 714 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FAM221BA6H8Z2 402 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 PRAMEF25A6NGN4 478 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FAM90A27PA6NNH2 459 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 PLSCR1O15162 318 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FOXS1O43638 330 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 IL18BPO95998 194 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 IL12RB1P42701 662 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 GLRBP48167 497 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 JAM2P57087 298 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SESN2P58004 480 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 MAP3K12Q12852 859 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 EIF4HQ15056 248 aaKnown RBP4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 TMEM200BQ69YZ2 307 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NPM2Q86SE8 214 aaKnown RBP4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 PTRH1Q86Y79 214 aaKnown RBP4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 LDLRAD3Q86YD5 345 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 DLG3Q92796 817 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 DNAJC7Q99615 494 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 TACO1Q9BSH4 297 aaKnown RBP4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 BOCQ9BWV1 1114 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NCOA5Q9HCD5 579 aaKnown RBP4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 BTBD7Q9P203 1132 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 RBPJLQ9UBG7 517 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 VWA7Q9Y334 891 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 ZDHHC9Q9Y397 364 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 PCDHA9Q9Y5H5 950 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 B3GALT1Q9Y5Z6 326 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 PTCH2Q9Y6C5 1203 aa4.37□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 ECE1P42892 770 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 KRTAP10-9P60411 292 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 RAC3P60763 192 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 WDR72Q3MJ13 1102 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 TCTN3Q6NUS6 607 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 CC2D1AQ6P1N0 951 aaPredicted RBP4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 BRAPQ7Z569 592 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 DDX53Q86TM3 631 aaKnown RBP4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 OSTM1Q86WC4 334 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 NME9Q86XW9 330 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 UBXN4Q92575 508 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 GNRHR2Q96P88 292 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 LMF1Q96S06 567 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 OR10A5Q9H207 317 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 TRIM39Q9HCM9 518 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SLC30A1Q9Y6M5 507 aa4.36□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 A0A0G2JNJ9 132 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 TCRBV16S1A1N1A0A5B0 115 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FOXP2O15409 715 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 RFPL3O75679 317 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 HMGCRP04035 888 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SRGAP2CP0DJJ0 459 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 IGFALSP35858 605 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 RPS19P39019 145 aaKnown RBP4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 DNM2P50570 870 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 KANK2Q63ZY3 851 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 OVCH1Q7RTY7 1134 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 RBM12BQ8IXT5 1001 aaKnown RBP4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SLC7A14Q8TBB6 771 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 EDAQ92838 391 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 MRFAP1L1Q96HT8 127 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 AGAP2Q99490 1192 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FOXB1Q99853 325 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 SLC39A2Q9NP94 309 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 Q9UFV3 132 aa4.35□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 MAFGO15525 162 aa4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 ARHGAP6O43182 974 aa4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 MPIG6BO95866 241 aa4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 ASLP04424 464 aa4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 KRT15P19012 456 aa4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 APEX1P27695 318 aaKnown RBP4.34□□□□□ -1.71
NPHP3-ACAD11-202ENST00000632629 FLT3P36888 993 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms