RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	PLPPR4	Q7Z2D5	763 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	TRAPPC12	Q8WVT3	735 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	ZBTB10	Q96DT7	871 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	FTHL17	Q9BXU8	183 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	FAM50B	Q9Y247	325 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	PCDHA2	Q9Y5H9	948 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	TRIO	O75962	3097 aa		11.79	□□□□□ -0.52
UBE3A-223	ENST00000631247	MEIS1	O00470	390 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	RB1	P06400	928 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	SCG2	P13521	617 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	SSTR3	P32745	418 aa	Predicted RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	SET	Q01105	290 aa	Predicted RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	KRT76	Q01546	638 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	FUT2	Q10981	343 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	ITGB3BP	Q13352	177 aa	Predicted RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	PFKFB3	Q16875	520 aa	Predicted RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	PUS10	Q3MIT2	529 aa	Known RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	TSGA10IP	Q3SY00	556 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	TCEAL5	Q5H9L2	206 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	MCTP2	Q6DN12	878 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	BLOC1S2	Q6QNY1	142 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	NIPA1	Q7RTP0	329 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	PLA2G4D	Q86XP0	818 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	CKAP2L	Q8IYA6	745 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	REXO1	Q8N1G1	1221 aa	Known RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	JAKMIP1	Q96N16	626 aa	Known RBP	11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	PCYT2	Q99447	389 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	LMAN2L	Q9H0V9	348 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	C6orf50	Q9HD87	102 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	LRFN2	Q9ULH4	789 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	GINS2	Q9Y248	185 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	LOXHD1	Q8IVV2	1947 aa		11.78	□□□□□ -0.52
UBE3A-223	ENST00000631247	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247		H3BQ06	376 aa	Predicted RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	ENPP3	O14638	875 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	STAG3L1	P0CL83	205 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	CDC27	P30260	824 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	ADD1	P35611	737 aa	Known RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	CLK2	P49760	499 aa	Known RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	APOBR	Q0VD83	1088 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	MIS18BP1	Q6P0N0	1132 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	PDXDC2P	Q6P474	469 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247		Q6ZUG5	572 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	NPAS4	Q8IUM7	802 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	NME8	Q8N427	588 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	BRF1	Q92994	677 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	PPP2R3C	Q969Q6	453 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	PABPC5	Q96DU9	382 aa	Known RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	ZNF577	Q9BSK1	485 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	CELF4	Q9BZC1	486 aa	Known RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	AGO3	Q9H9G7	860 aa	Known RBP	11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	ZNF302	Q9NR11	478 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	CLDND1	Q9NY35	253 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	PADI3	Q9ULW8	664 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	HCN4	Q9Y3Q4	1203 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	SQOR	Q9Y6N5	450 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	IGSF9B	Q9UPX0	1349 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	COL1A2	P08123	1366 aa		11.77	□□□□□ -0.53
UBE3A-223	ENST00000631247	KIAA1671	Q9BY89	1806 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	ATG2A	Q2TAZ0	1938 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	TTC3	P53804	2025 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	SMIM35	A0A1B0GVV1	85 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	C5orf67	F2Z3F1	127 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	TULP1	O00294	542 aa	Predicted RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	IPO5	O00410	1097 aa	Known RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	NCK2	O43639	380 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	HBP1	O60381	514 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	DGKI	O75912	1065 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	CPA1	P15085	419 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	IL9	P15248	144 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	KLRC1	P26715	233 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	GNA11	P29992	359 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	BMPR1A	P36894	532 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	NFX1	Q12986	1120 aa	Known RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	PAN2	Q504Q3	1202 aa	Known RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	TMEM31	Q5JXX7	168 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	ODR4	Q5SWX8	454 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	MTHFD1L	Q6UB35	978 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	CMTR2	Q8IYT2	770 aa	Known RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	CCDC148	Q8NFR7	591 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	BICD2	Q8TD16	824 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	ATP8B4	Q8TF62	1192 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	RAPGEFL1	Q9UHV5	662 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	SAMM50	Q9Y512	469 aa		11.76	□□□□□ -0.53
UBE3A-223	ENST00000631247	ESYT2	A0FGR8	921 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	DENND3	A2RUS2	1198 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	FAM86B1	E9PN63	330 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	GRM6	O15303	877 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	RPS6KA5	O75582	802 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	REC8	O95072	547 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	ATG7	O95352	703 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	CCNE2	O96020	404 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	MMP1	P03956	469 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	FAM86B2	P0C5J1	330 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	TMEM266	Q2M3C6	531 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	ZNF484	Q5JVG2	852 aa		11.75	□□□□□ -0.53
UBE3A-223	ENST00000631247	PPP1R15B	Q5SWA1	713 aa		11.75	□□□□□ -0.53

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