RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MAPK7Q13164 816 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ARHGAP29Q52LW3 1261 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SNRNP48Q6IEG0 339 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 DPY19L2P1Q6NXN4 242 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PDXDC1Q6P996 788 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PADI6Q6TGC4 694 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 NSMFQ6X4W1 530 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SLC30A10Q6XR72 485 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 LBX2Q6XYB7 198 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 USP50Q70EL3 339 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.12□□□□□ -1.43
NEK3-211ENST00000629912 C12orf56Q8IXR9 622 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SMAP1Q8IYB5 467 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 DAW1Q8N136 415 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 BANK1Q8NDB2 785 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SLC17A8Q8NDX2 589 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ACRBPQ8NEB7 543 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 DNERQ8NFT8 737 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ZC3H15Q8WU90 426 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 WNK4Q96J92 1243 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ZFP91Q96JP5 570 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 INPP4AQ96PE3 977 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 NTPCRQ9BSD7 190 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 MOV10L1Q9BXT6 1211 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 PDCL3Q9H2J4 239 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ACAD9Q9H845 621 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 NHEJ1Q9H9Q4 299 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 HOMER2Q9NSB8 354 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 CYP39A1Q9NYL5 469 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 AIPL1Q9NZN9 384 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 CEP72Q9P209 647 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ARMCX3Q9UH62 379 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 FBXO40Q9UH90 709 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 KCNG1Q9UIX4 513 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 FBXL5Q9UKA1 691 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 ZNF215Q9UL58 517 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 MYO6Q9UM54 1294 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 DAAM1Q9Y4D1 1078 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PCDHA10Q9Y5I2 948 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SNCAIPQ9Y6H5 919 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 MYH9P35579 1960 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 WDR90Q96KV7 1748 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 ASTN1O14525 1302 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 SPDYE16A6NNV3 312 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 EFCAB8A8MWE9 144 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 IRF6O14896 467 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 EPHB6O15197 1021 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 MAPK13O15264 365 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 PJA2O43164 708 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 HIP1RO75146 1068 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 EIF3JO75822 258 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 AKAP3O75969 853 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 STBD1O95210 358 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 ATG7O95352 703 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 CCNE2O96020 404 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 AFPP02771 609 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 SERPING1P05155 500 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 EPB41P11171 864 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 PLS3P13797 630 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 KCNA2P16389 499 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 IREB2P48200 963 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 HERVK_113P62684 666 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 GTF2BQ00403 316 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 VGLL4Q14135 290 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 PPP2R5AQ15172 486 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 SPA17Q15506 151 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 ASTE1Q2TB18 679 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 ZNF569Q5MCW4 686 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 ODR4Q5SWX8 454 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 RRAGAQ7L523 313 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 OTUD6AQ7L8S5 288 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 HS2ST1Q7LGA3 356 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 RIOX2Q8IUF8 465 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 SULF1Q8IWU6 871 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 FAM178BQ8IXR5 827 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 TXLNBQ8N3L3 684 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 PDCL2Q8N4E4 241 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 PROCA1Q8NCQ7 364 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 SMCR8Q8TEV9 937 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 TSC1Q92574 1164 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 KCNN1Q92952 543 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 L3MBTL3Q96JM7 780 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 CCDC42Q96M95 316 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 ACCSQ96QU6 501 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 SYT17Q9BSW7 474 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 IRX2Q9BZI1 471 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 FHDC1Q9C0D6 1143 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 GBP3Q9H0R5 595 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 BCAS3Q9H6U6 928 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 TMEM206Q9H813 350 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 C17orf75Q9HAS0 396 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 LZTFL1Q9NQ48 299 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 A1CFQ9NQ94 594 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 FAM207AQ9NSI2 230 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 ARHGAP20Q9P2F6 1191 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 LARSQ9P2J5 1176 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 CDC23Q9UJX2 597 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 CSADQ9Y600 493 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms