RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GABRQQ9UN88 632 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 GCNT3O95395 438 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 TEX2Q8IWB9 1127 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 ARRDC4Q8NCT1 418 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 UNC45AQ9H3U1 944 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 ITGB5P18084 799 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 STRN3Q13033 797 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 IQSEC1Q6DN90 963 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 METTL7BQ6UX53 244 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 L2HGDHQ9H9P8 463 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 UTRNP46939 3433 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 BCRP11274 1271 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 PRPHP41219 470 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 DPYDQ12882 1025 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 TCERG1LQ5VWI1 586 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 GNAT1P11488 350 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 PPP1R2P41236 205 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 STX17P56962 302 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 NLRP4Q96MN2 994 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 CCDC94Q9BW85 323 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 PSMA7O14818 248 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 SRGAP2CP0DJJ0 459 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 CASP1P29466 404 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 PPFIA1Q13136 1202 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 ODR4Q5SWX8 454 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 REXO1L1PQ8IX06 675 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 FAM178BQ8IXR5 827 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 NPLOC4Q8TAT6 608 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 PAGE5Q96GU1 130 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 TRIM6Q9C030 488 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 R3HDMLQ9H3Y0 253 aa13.74□□□□□ -0.21
SYNGAP1-207ENST00000628646 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZNF286BP0CG31 522 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 HSP90AA4PQ58FG1 418 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 CT47A1Q5JQC4 288 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 NELFCDQ8IXH7 590 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 GOLGA6L9A6NEM1 432 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 SFI1A8K8P3 1242 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PDIA5Q14554 519 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZNHIT6Q9NWK9 470 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 STK17AQ9UEE5 414 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PAPPA2Q9BXP8 1791 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 ATP9AO75110 1047 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 INHAP05111 366 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 SLFN14P0C7P3 912 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PBX1P40424 430 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PRKCEQ02156 737 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 DMP1Q13316 513 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 Q4G0T1 1027 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZNF746Q6NUN9 644 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PADI6Q6TGC4 694 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 NR1I3Q14994 352 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 CCDC40Q4G0X9 1142 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PLA2G4FQ68DD2 849 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 TC2NQ8N9U0 490 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 SAMSN1Q9NSI8 373 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
SYNGAP1-207ENST00000628646 PPP1R3GB7ZBB8 358 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 NKRFO15226 690 aaKnown RBP eCLIP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 YWHABP31946 246 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 MRPS9P82933 396 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 GRB14Q14449 540 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 FSCN1Q16658 493 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 PCSK9Q8NBP7 692 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 LRRN4CLQ8ND94 238 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 PANK4Q9NVE7 773 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 PTCH2Q9Y6C5 1203 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 FAM155AB1AL88 458 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 K7ENM7 598 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 CYP3A4P08684 503 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 XKR3Q5GH77 459 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 CNNM4Q6P4Q7 775 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 PPP1R13LQ8WUF5 828 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 MMRN2Q9H8L6 949 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms