RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SMIM24O75264 130 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 FGGP02679 453 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 PDIK1LQ8N165 341 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 NGRNQ9NPE2 291 aaKnown RBP13.77□□□□□ -0.21
SCN8A-209ENST00000627620 EPS15L1Q9UBC2 864 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 FEM1BQ9UK73 627 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 ZNF394Q53GI3 561 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 GDAP1Q8TB36 358 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 PYROXD1Q8WU10 500 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 CLDN3O15551 220 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 PLS3P13797 630 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 LRRC43Q8N309 656 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 HOXC10Q9NYD6 342 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 ZHX2Q9Y6X8 837 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 FAM196BA6NMK8 535 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 CENPUQ71F23 418 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 MCPH1Q8NEM0 835 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 UTYO14607 1347 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 SPATA31A3Q5VYP0 1347 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 WDR91A4D1P6 747 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 E9PMD0 336 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 ECE2O60344 883 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 NR3C1P04150 777 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 CASP1P29466 404 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 ELF1P32519 619 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 SLC44A5Q8NCS7 719 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 RAD54LQ92698 747 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
SCN8A-209ENST00000627620 DNAJC17Q9NVM6 304 aaKnown RBP13.76□□□□□ -0.21
SCN8A-209ENST00000627620 GNGT2O14610 69 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 OXER1Q8TDS5 423 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 MYO3BQ8WXR4 1341 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 NVLO15381 856 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 ALS2CLQ60I27 953 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 TBC1D9BQ66K14 1250 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 RCSD1Q6JBY9 416 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 RWDD4Q6NW29 188 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 BZW1Q7L1Q6 419 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 CELF1Q92879 486 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 CEP72Q9P209 647 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 ABCB11O95342 1321 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 TTI1O43156 1089 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 TBC1D22BQ9NU19 505 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 PPP6R3Q5H9R7 873 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 SLC27A3Q5K4L6 730 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 XXYLT1Q8NBI6 393 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 PPP1R9AQ9ULJ8 1098 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 COL15A1P39059 1388 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 BNIP3LO60238 219 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 TJP3O95049 919 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 PMLP29590 882 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 EIF3BP55884 814 aaKnown RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 MAPK6Q16659 721 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
SCN8A-209ENST00000627620 GIMAP8Q8ND71 665 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-209ENST00000627620 IQANK1A0A1B0GTG1 560 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 GCLMP48507 274 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 CUL1Q13616 776 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 FAM133BQ5BKY9 247 aaKnown RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ANKRD20A8PQ5CZ79 823 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ANKRD20A2Q5SQ80 823 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ANKRD20A1Q5TYW2 823 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 DYDC2Q96IM9 177 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 MXD3Q9BW11 206 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 CNOT8Q9UFF9 292 aaKnown RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ANAPC7Q9UJX3 599 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 SPECC1L-ADORA2AF8WAN1 911 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 PALMO75781 387 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ACSL3O95573 720 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 SOX5P35711 763 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 FAF2Q96CS3 445 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 KLHL29Q96CT2 875 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 ABCF3Q9NUQ8 709 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 G3BP2Q9UN86 482 aaKnown RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 PROM2Q8N271 834 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms