RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TMEM265A0A087WTH1 108 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 VPS37CA5D8V6 355 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 KIF28PB7ZC32 967 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 ZNF862O60290 1169 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 LYPLA2O95372 231 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 C22orf31O95567 290 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 XRCC6P12956 609 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 ATP4AP20648 1035 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 KCNJ6P48051 423 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 EPHB4P54760 987 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 IKBKEQ14164 716 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 PDIA5Q14554 519 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 ZNF174Q15697 407 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 C9orf50Q5SZB4 431 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 DEFB128Q7Z7B8 93 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 KCTD17Q8N5Z5 321 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 SLC7A3Q8WY07 619 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 GJA10Q969M2 543 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 CCDC43Q96MW1 224 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 SLC9A7Q96T83 725 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 LXNQ9BS40 222 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 TUFT1Q9NNX1 390 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 SLC4A7Q9Y6M7 1214 aa15.69■□□□□ 0.1
SNRPA1-216ENST00000626000 ZBTB42B2RXF5 422 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 EML1O00423 815 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 ACRP10323 421 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 RFC5P40937 340 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 RAB30Q15771 203 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 UGCGQ16739 394 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 ARL6IP4Q66PJ3 421 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 TRAF7Q6Q0C0 670 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 C16orf59Q7L2K0 433 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 BANK1Q8NDB2 785 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 WNT8BQ93098 351 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 EIF2AK1Q9BQI3 630 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 FAM49AQ9H0Q0 323 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 TRPV2Q9Y5S1 764 aa15.68■□□□□ 0.1
SNRPA1-216ENST00000626000 SCN5AQ14524 2016 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 DDX11L8A8MPP1 907 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 ZBBXA8MT70 800 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 NBNO60934 754 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 CTSHP09668 335 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 SYT1P21579 422 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 YWHABP31946 246 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 FXR1P51114 621 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 PTGDRQ13258 359 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 BECN1Q14457 450 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 PLEKHG4Q58EX7 1191 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 RUFY4Q6ZNE9 571 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 TSHZ1Q6ZSZ6 1077 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 OTOP2Q7RTS6 562 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 METTL13Q8N6R0 699 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 TRAPPC12Q8WVT3 735 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 HSD17B14Q9BPX1 270 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 FTHL17Q9BXU8 183 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 CELF4Q9BZC1 486 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 ANKEF1Q9NU02 776 aa15.67■□□□□ 0.1
SNRPA1-216ENST00000626000 SLC26A4O43511 780 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 RPA1P27694 616 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 TOB1P50616 345 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 MGAT3Q09327 533 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 FAM109BQ6ICB4 259 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 EFCAB12Q6NXP0 572 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 TPH2Q8IWU9 490 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 KIAA0319LQ8IZA0 1049 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 TCP11Q8WWU5 503 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 IFIH1Q9BYX4 1025 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 PCDHB6Q9Y5E3 794 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 CDY2AQ9Y6F7 541 aa15.66■□□□□ 0.1
SNRPA1-216ENST00000626000 LOXHD1Q8IVV2 1947 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 WNT7AO00755 349 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 STX6O43752 255 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 MAFO75444 373 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 SLITRK3O94933 977 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 CHRNA1P02708 482 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 AMHP03971 560 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 ATP2A2P16615 1042 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 TECP42680 631 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 CRYBB1P53674 252 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 POLGP54098 1239 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 CYP4A11Q02928 519 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 MTERF2Q49AM1 385 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 FBXO47Q5MNV8 452 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 ANO5Q75V66 913 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 TRMT1LQ7Z2T5 733 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 CEP170P1Q96L14 293 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 AK8Q96MA6 479 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 NACC1Q96RE7 527 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 LRWD1Q9UFC0 647 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms