RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 JADE1Q6IE81 842 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RAD9BQ6WBX8 426 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MAP7D3Q8IWC1 876 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PARP9Q8IXQ6 854 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CCHCR1Q8TD31 782 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 HESX1Q9UBX0 185 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 GGT7Q9UJ14 662 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 FBXL5Q9UKA1 691 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 USP6P35125 1406 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PODXLO00592 558 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SETSIPP0DME0 302 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ECE1P42892 770 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CRKLP46109 303 aaKnown RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MECOMQ03112 1051 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CTTNQ14247 550 aaKnown RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ABCB5Q2M3G0 1257 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 GNPTABQ3T906 1256 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ENAHQ8N8S7 591 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CXorf38Q8TB03 319 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PYROXD1Q8WU10 500 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ACCSQ96QU6 501 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 NACC1Q96RE7 527 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TAF1DQ9H5J8 278 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SAYSD1Q9NPB0 183 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 GINM1Q9NU53 330 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TAF6LQ9Y6J9 622 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ALS2Q96Q42 1657 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 NRAPQ86VF7 1730 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 LOC102724428A0A0B4J2F2 783 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 GYG2O15488 501 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MEFVO15553 781 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PPP1R37O75864 691 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 NCF2P19878 526 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PMS2P54278 862 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SIK1P57059 783 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 KIF22Q14807 665 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 BRDTQ58F21 947 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RINT1Q6NUQ1 792 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RAPH1Q70E73 1250 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ZBTB8OSQ8IWT0 167 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SYT2Q8N9I0 419 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TTC17Q96AE7 1141 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 HOOK2Q96ED9 719 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ETNK1Q9HBU6 452 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CCPG1Q9ULG6 757 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RGPD8O14715 1765 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 STK36Q9NRP7 1315 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 E9PMD0 336 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PPFIA2O75334 1257 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CPP00450 1065 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ACTN1P12814 892 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ATP2B4P23634 1241 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 IL6STP40189 918 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SPARCL1Q14515 664 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SEPT2Q15019 361 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TSGA10IPQ3SY00 556 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 LRRC23Q53EV4 343 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TMC4Q7Z404 712 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TRIM42Q8IWZ5 723 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RHOT2Q8IXI1 618 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TC2NQ8N9U0 490 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 NOA1Q8NC60 698 aaKnown RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MORC4Q8TE76 937 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PIGOQ8TEQ8 1089 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TRIM11Q96F44 468 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MS4A14Q96JA4 679 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RIOK1Q9BRS2 568 aaKnown RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 ALDH8A1Q9H2A2 487 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 XAB2Q9HCS7 855 aaKnown RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 LIMA1Q9UHB6 759 aaKnown RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 AMACRQ9UHK6 382 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SERPINB13Q9UIV8 391 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 DCTN4Q9UJW0 460 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MCF2LO15068 1137 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 GDF11O95390 407 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 FCER1AP12319 257 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 BRAFP15056 766 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 HOXA13P31271 388 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 KCNQ4P56696 695 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SATB1Q01826 763 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 PFKFB3Q16875 520 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 HP1BP3Q5SSJ5 553 aaPredicted RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 DNAJC24Q6P3W2 148 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 DARS2Q6PI48 645 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 USP49Q70CQ1 688 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 NSMCE1Q8WV22 266 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CHMP6Q96FZ7 201 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 DYDC2Q96IM9 177 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 LRGUKQ96M69 825 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 MRPL47Q9HD33 250 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 KMT5AQ9NQR1 393 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 ANLNQ9NQW6 1124 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 SMARCAL1Q9NZC9 954 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 PPARGC1AQ9UBK2 798 aaKnown RBP6.05□□□□□ -1.44
ERCC6-213ENST00000624341 FIS1Q9Y3D6 152 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 GLI3P10071 1580 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 A0A1B0GTH6 734 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 FAM205CA6NFA0 338 aa6.05□□□□□ -1.44
ERCC6-213ENST00000624341 CD58P19256 250 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms