RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ITIH4Q14624 930 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ODR4Q5SWX8 454 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 CYP4F22Q6NT55 531 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 SNAP23O00161 211 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 TNFRSF8P28908 595 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 MAPK4P31152 587 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 TROAPQ12815 778 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ZNF449Q6P9G9 518 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ANGPTL2Q9UKU9 493 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 CA4P22748 312 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 AOC3Q16853 763 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 LRRC23Q53EV4 343 aaPredicted RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 TEX9Q8N6V9 391 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 TGS1Q96RS0 853 aaKnown RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 TMEM60Q9H2L4 133 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ARHGAP20Q9P2F6 1191 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 FAM170AA1A519 330 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 STXBP3O00186 592 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 PBX1P40424 430 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 BPIFB4P59827 614 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 SNX1Q13596 522 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 KNOP1Q1ED39 458 aaKnown RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 AEBP2Q6ZN18 517 aaPredicted RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 SDCCAG8Q86SQ7 713 aaPredicted RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 PRMT1Q99873 361 aaKnown RBP12.74□□□□□ -0.37
ATRX-214ENST00000624166 Q9H521 79 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
ATRX-214ENST00000624166 GLI1P08151 1106 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 PDE6BP35913 854 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 GPC5P78333 572 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 HSP90AA5PQ58FG0 334 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 FAM167BQ9BTA0 163 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 BSDC1Q9NW68 430 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 SUCLA2Q9P2R7 463 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 K7ENM7 598 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 PPP1R12AO14974 1030 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 NR3C1P04150 777 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 CASP7P55210 303 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 DPP8Q6V1X1 898 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 SPATA20Q8TB22 786 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 NSMCE1Q8WV22 266 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 ROPN1BQ9BZX4 212 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 ROPN1Q9HAT0 212 aaPredicted RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 ATXN2Q99700 1313 aaKnown RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 PNMA6FA0A0J9YX94 578 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 CYP2D6P10635 497 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 NSFP46459 744 aaKnown RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 RAD23BP54727 409 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 SLC8A3P57103 927 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 DYNC1I2Q13409 638 aaKnown RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 USH1GQ495M9 461 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
ATRX-214ENST00000624166 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 DDX42Q86XP3 938 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATRX-214ENST00000624166 CD302Q8IX05 232 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 HPS3Q969F9 1004 aa12.73□□□□□ -0.37
ATRX-214ENST00000624166 ARHGAP42A6NI28 874 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 TCP11X1B4DZS4 312 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 RASA4BC9J798 803 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 RASA4O43374 803 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 BFSP1Q12934 665 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 BIRC2Q13490 618 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 TRMT10CQ7L0Y3 403 aaKnown RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 EPM2AIP1Q7L775 607 aaPredicted RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 HDAC7Q8WUI4 952 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 NT5C1BQ96P26 610 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 UBE2TQ9NPD8 197 aaPredicted RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 INTUQ9ULD6 942 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 MYMKA6NI61 221 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 FOXP2O15409 715 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 TTLL1O95922 423 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 HSPA1LP34931 641 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 FAM47EQ6ZV65 393 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.375e-8■■■■□ 25.7
ATRX-214ENST00000624166 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 DDX23Q9BUQ8 820 aaKnown RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 PARVGQ9HBI0 331 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 HNRNPCL1O60812 293 aaKnown RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 DKC1O60832 514 aaKnown RBP eCLIP12.72□□□□□ -0.37
ATRX-214ENST00000624166 RFX1P22670 979 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms