RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 CCDC178Q5BJE1 867 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 GKAP1Q5VSY0 366 aaPredicted RBP6.23□□□□□ -1.41
EBF1-211ENST00000622875 RUFY3Q7L099 469 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 B4GALNT2Q8NHY0 566 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 FAM81AQ8TBF8 368 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 NCDNQ9UBB6 729 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 RCAN3Q9UKA8 241 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 PRELID1Q9Y255 219 aa6.23□□□□□ -1.41
EBF1-211ENST00000622875 FOCADQ5VW36 1801 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 CACNA1FO60840 1977 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 C5orf67F2Z3F1 127 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 EIF2S1P05198 315 aaKnown RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 MAP4K1Q92918 833 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 SPDL1Q96EA4 605 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 PLA2G12BQ9BX93 195 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 BHMT2Q9H2M3 363 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 PRM3Q9NNZ6 103 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 ARFGAP3Q9NP61 516 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 LARSQ9P2J5 1176 aaKnown RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 ZNF711Q9Y462 761 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 USP17L5A8MUK1 530 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 BECN2A8MW95 431 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 SMIM24O75264 130 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 TMCC1O94876 653 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 RRP1P56182 461 aaKnown RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 BACE1P56817 501 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 CCT2P78371 535 aaKnown RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 OLR1P78380 273 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 IQCB1Q15051 598 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 CCDC122Q5T0U0 273 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 MAATS1Q7Z4T9 603 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 SPATA21Q7Z572 469 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 GREM2Q9H772 168 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 EMC3Q9P0I2 261 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 CLEC1BQ9P126 229 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 SUN2Q9UH99 717 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 PITPNM1O00562 1244 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 LILRB5O75023 590 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 EFCAB14O75071 495 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 YEATS4O95619 227 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 ADORA2AP29274 412 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 CCL23P55773 120 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 RCSD1Q6JBY9 416 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 HOMER1Q86YM7 354 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 KREMEN2Q8NCW0 462 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 BBOF1Q8ND07 529 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 NELL1Q92832 810 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 MIEF2Q96C03 454 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 RPGRIP1Q96KN7 1286 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 API5Q9BZZ5 524 aaKnown RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 MRPL11Q9Y3B7 192 aaKnown RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 MGEA5O60502 916 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 COBLO75128 1261 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 CAPNS1P04632 268 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 PPM1FP49593 454 aaPredicted RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 PTPN14Q15678 1187 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 GRIK5Q16478 980 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 GRAMD4Q6IC98 578 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 MYO1HQ8N1T3 1032 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 DRAXINQ8NBI3 349 aaPredicted RBP6.22□□□□□ -1.41
EBF1-211ENST00000622875 HELLSQ9NRZ9 838 aa6.22□□□□□ -1.41
EBF1-211ENST00000622875 E9PMD0 336 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 TBC1D4O60343 1298 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 PEX10O60683 326 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 ASGR1P07306 291 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 ZC3H12AQ5D1E8 599 aaKnown RBP6.21□□□□□ -1.41
EBF1-211ENST00000622875 NANOGNBQ7Z5D8 188 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 TRIM58Q8NG06 486 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 ERMNQ8TAM6 284 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 ZCCHC14Q8WYQ9 949 aaKnown RBP6.21□□□□□ -1.41
EBF1-211ENST00000622875 NUF2Q9BZD4 464 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 SIL1Q9H173 461 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 SPATA7Q9P0W8 599 aa6.21□□□□□ -1.41
EBF1-211ENST00000622875 USP15Q9Y4E8 981 aaPredicted RBP6.21□□□□□ -1.41
EBF1-211ENST00000622875 KIAA1671Q9BY89 1806 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 MYH2Q9UKX2 1941 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 CPLX1O14810 134 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 KIF11P52732 1056 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 GSCP56915 257 aaPredicted RBP6.21□□□□□ -1.42
EBF1-211ENST00000622875 G3BP1Q13283 466 aaKnown RBP eCLIP6.21□□□□□ -1.42
EBF1-211ENST00000622875 CDC42EP5Q6NZY7 148 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 FAM84BQ96KN1 310 aaPredicted RBP6.21□□□□□ -1.42
EBF1-211ENST00000622875 TTC1Q99614 292 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 PSD3Q9NYI0 1048 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 ATP5J2-PTCD1G3V325 749 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 HIP1RO75146 1068 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 NAT1P18440 290 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 CD53P19397 219 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 S100A1P23297 94 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 STIP1P31948 543 aaKnown RBP6.21□□□□□ -1.42
EBF1-211ENST00000622875 SNCBQ16143 134 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 C11orf91Q3C1V1 193 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 CAPRIN2Q6IMN6 1127 aaKnown RBP6.21□□□□□ -1.42
EBF1-211ENST00000622875 SH3BP5LQ7L8J4 393 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 HOOK3Q86VS8 718 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 HDAC7Q8WUI4 952 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 CTAGE1Q96RT6 745 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 SLC39A3Q9BRY0 314 aa6.21□□□□□ -1.42
EBF1-211ENST00000622875 DRC3Q9H069 523 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms