RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MAGEB2O15479 319 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 C22orf31O95567 290 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 P4HBP07237 508 aaKnown RBP15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 OR52Z1P0C646 297 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 TMOD1P28289 359 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 TBC1D8BQ0IIM8 1120 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 EPHA7Q15375 998 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 RAB30Q15771 203 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 Q7L0L9 218 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 FAM161BQ96MY7 647 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 MAP7D2Q96T17 732 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 PBX4Q9BYU1 374 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
PCDHGC3-208ENST00000622836 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 PBX2P40425 430 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 RABGGTBP53611 331 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 WDR5P61964 334 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 CYP4A11Q02928 519 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 MGAT3Q09327 533 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 CUL4AQ13619 759 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 PLEKHG4Q58EX7 1191 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 EFCAB12Q6NXP0 572 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 TPH2Q8IWU9 490 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 PHOSPHO2Q8TCD6 241 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 APBB2Q92870 758 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 TIFAQ96CG3 184 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 DYDC2Q96IM9 177 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 MTMR9Q96QG7 549 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 PPP1R16BQ96T49 567 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 LXNQ9BS40 222 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 CELF4Q9BZC1 486 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 AKT3Q9Y243 479 aa15.67■□□□□ 0.1
PCDHGC3-208ENST00000622836 WDR81Q562E7 1941 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 TMEM150BA6NC51 233 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 AMHP03971 560 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 CLCN3P51790 818 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 SPIRE1Q08AE8 756 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 CTTNQ14247 550 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 NBR1Q14596 966 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 TMEM266Q2M3C6 531 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 TCTN1Q2MV58 587 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 TSHZ1Q6ZSZ6 1077 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 KIAA0319LQ8IZA0 1049 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 LRRC71Q8N4P6 559 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 CCDC43Q96MW1 224 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 EIF2AK1Q9BQI3 630 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 SH2D3AQ9BRG2 576 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 ZBED2Q9BTP6 218 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 ZSWIM4Q9H7M6 989 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
PCDHGC3-208ENST00000622836 VPS37CA5D8V6 355 aaPredicted RBP15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 POTEMA6NI47 508 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 VTNP04004 478 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 PDCP20941 246 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 TECP42680 631 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 DEFB103AP81534 67 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 LPIN1Q14693 890 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 FBXO47Q5MNV8 452 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 PLA2G4FQ68DD2 849 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 OTUD6AQ7L8S5 288 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 HERC6Q8IVU3 1022 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 MYOCDQ8IZQ8 938 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 NEK9Q8TD19 979 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 CEP170P1Q96L14 293 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 OSBPL7Q9BZF2 842 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 SLC28A3Q9HAS3 691 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 EVPLQ92817 2033 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 SZT2Q5T011 3432 aa15.65■□□□□ 0.1
PCDHGC3-208ENST00000622836 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 TLL1O43897 1013 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 HSP90AA1P07900 732 aaKnown RBP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 CD52P31358 61 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 YWHABP31946 246 aaKnown RBP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 DNM2P50570 870 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 PAK2Q13177 524 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 KIZQ2M2Z5 673 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 RILPL1Q5EBL4 403 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 FAM117BQ6P1L5 589 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 ANO5Q75V66 913 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 TMCO2Q7Z6W1 182 aaPredicted RBP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 C4orf19Q8IY42 314 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 USP38Q8NB14 1042 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 ERMNQ8TAM6 284 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 JPH2Q9BR39 696 aaPredicted RBP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 NKX2-4Q9H2Z4 354 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 CYP26B1Q9NR63 512 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 WRAP73Q9P2S5 460 aaPredicted RBP15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 PCDHB6Q9Y5E3 794 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 PCDHA11Q9Y5I1 949 aa15.64■□□□□ 0.09
PCDHGC3-208ENST00000622836 STBD1O95210 358 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms