RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GALNT8Q9NY28 637 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
LITAF-221ENST00000622633 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 TMEM221A6NGB7 291 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 LRRC53A6NM62 1247 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 AKR1B10O60218 316 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 TACC1O75410 805 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 E2F6O75461 281 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 DNAJC8O75937 253 aaPredicted RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 EPB41P11171 864 aaKnown RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 PLCG2P16885 1265 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 TNNI2P48788 182 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 MRPS25P82663 173 aaKnown RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 ECM1Q16610 540 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 GUF1Q8N442 669 aaKnown RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 RAD54LQ92698 747 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 DDX12PQ92771 950 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 UIMC1Q96RL1 719 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 PSMB7Q99436 277 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 SNX12Q9UMY4 172 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 FAM107AO95990 144 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 CNGA1P29973 690 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 GUCY1A3Q02108 690 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 ORC2Q13416 577 aaPredicted RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 PICALMQ13492 652 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 PRPF4BQ13523 1007 aaKnown RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 UBE2SQ16763 222 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 TSNAXIP1Q2TAA8 658 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 LACTB2Q53H82 288 aaPredicted RBP13.54□□□□□ -0.24
LITAF-221ENST00000622633 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 ANKRD13CQ8N6S4 541 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 MTMR4Q9NYA4 1195 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 GGA1Q9UJY5 639 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 COL24A1Q17RW2 1714 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 NAV1Q8NEY1 1877 aa13.54□□□□□ -0.24
LITAF-221ENST00000622633 EIF4E1BA6NMX2 242 aaKnown RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 NPTXRO95502 500 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 IL1R1P14778 569 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 ALDH3A1P30838 453 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 NOVP48745 357 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 RIPK1Q13546 671 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 LRRC55Q6ZSA7 311 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 CCHCR1Q8TD31 782 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 DHRS1Q96LJ7 313 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 TANGO6Q9C0B7 1094 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 SMARCAL1Q9NZC9 954 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 LGR5O75473 907 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 PPP1R37O75864 691 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 AKR1B1P15121 316 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 CXCR5P32302 372 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
LITAF-221ENST00000622633 TUBP50607 506 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 PRR5LQ6MZQ0 368 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 DPP8Q6V1X1 898 aaPredicted RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
LITAF-221ENST00000622633 AGAP11Q8TF27 550 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 BAP1Q92560 729 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 IQCDQ96DY2 449 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
LITAF-221ENST00000622633 DDX60LQ5H9U9 1706 aaKnown RBP13.52□□□□□ -0.24
LITAF-221ENST00000622633 ATP2B4P23634 1241 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 MAGEA1P43355 309 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 MXRA7P84157 204 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 DYNC1I2Q13409 638 aaKnown RBP13.52□□□□□ -0.24
LITAF-221ENST00000622633 BTG3Q14201 252 aaPredicted RBP13.52□□□□□ -0.24
LITAF-221ENST00000622633 TTBK2Q6IQ55 1244 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.24
LITAF-221ENST00000622633 SMYD1Q8NB12 490 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 RAB34Q9BZG1 259 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 SALL4Q9UJQ4 1053 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 MYH1P12882 1939 aa13.52□□□□□ -0.24
LITAF-221ENST00000622633 ZNF831Q5JPB2 1677 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 SBF2Q86WG5 1849 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 LRRD1A4D1F6 860 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 SMAPO00193 183 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 NCK2O43639 380 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
LITAF-221ENST00000622633 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.25
LITAF-221ENST00000622633 LRRC63Q05C16 580 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 GFPT1Q06210 699 aaPredicted RBP13.52□□□□□ -0.25
LITAF-221ENST00000622633 KCNMA1Q12791 1236 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 TMEM119Q4V9L6 283 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 CCDC38Q502W7 563 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 MAIP1Q8WWC4 291 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms