RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 DNAJC28Q9NX36 388 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 NOB1Q9ULX3 412 aaKnown RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 PPP2R3BQ9Y5P8 575 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 GOLGA6CA6NDK9 693 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 GOLGA6BA6NDN3 693 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 HRKO00198 91 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 PRPF3O43395 683 aaKnown RBP6.46□□□□□ -1.38
CPNE3-213ENST00000622183 HYAL3O43820 417 aaPredicted RBP6.46□□□□□ -1.38
CPNE3-213ENST00000622183 PRLP01236 227 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 GOLGA6DP0CG33 693 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 PDE6BP35913 854 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 EFCAB2Q5VUJ9 269 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 IRF2BP1Q8IU81 584 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 TPH2Q8IWU9 490 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 CCDC146Q8IYE0 955 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 HSPBAP1Q96EW2 488 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 MAML3Q96JK9 1138 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 TEKT5Q96M29 485 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 MYL10Q9BUA6 226 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 NGRNQ9NPE2 291 aaKnown RBP6.46□□□□□ -1.38
CPNE3-213ENST00000622183 GOLGA6AQ9NYA3 693 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 ARHGAP28Q9P2N2 729 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 INVSQ9Y283 1065 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 GPR45Q9Y5Y3 372 aa6.46□□□□□ -1.38
CPNE3-213ENST00000622183 PRAMEF22A3QJZ6 481 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ELL2O00472 640 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-213ENST00000622183 PRPF6O94906 941 aaKnown RBP6.45□□□□□ -1.38
CPNE3-213ENST00000622183 MPIG6BO95866 241 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 CLEC2LP0C7M8 214 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 VCAM1P19320 739 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 AGXTP21549 392 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 PTGS1P23219 599 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 THBS2P35442 1172 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 MTNR1BP49286 362 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 SRSF2Q01130 221 aaKnown RBP6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ALDH6A1Q02252 535 aaKnown RBP6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ROM1Q03395 351 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 TCIRG1Q13488 830 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPNE3-213ENST00000622183 MYBPC3Q14896 1274 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ACAP2Q15057 778 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 UGT8Q16880 541 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPNE3-213ENST00000622183 PITRM1Q5JRX3 1037 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ZBTB41Q5SVQ8 909 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ZMYM1Q5SVZ6 1142 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 PRAMEF18Q5VWM3 479 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 OLFML2BQ68BL8 750 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 SLFN12LQ6IEE8 588 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 KANSL1Q7Z3B3 1105 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 KCNK18Q7Z418 384 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 JADE3Q92613 823 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 ALG3Q92685 438 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 FERMT2Q96AC1 680 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 RAX2Q96IS3 184 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 TUBGCP5Q96RT8 1024 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 BCAS3Q9H6U6 928 aa6.45□□□□□ -1.38
CPNE3-213ENST00000622183 PRSS38A1L453 326 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 NFIBO00712 420 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 ZRANB2O95218 330 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPNE3-213ENST00000622183 MTHFD2P13995 350 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 MC4RP32245 332 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CYP2C19P33261 490 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 STAT5AP42229 794 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 NKX3-2P78367 333 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 MRPS9P82933 396 aaKnown RBP6.44□□□□□ -1.38
CPNE3-213ENST00000622183 HTRA3P83110 453 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 SLC6A3Q01959 620 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CR1LQ2VPA4 569 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CT83Q5H943 113 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 KIAA1841Q6NSI8 718 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CBLL1Q75N03 491 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 ZC3H18Q86VM9 953 aaKnown RBP6.44□□□□□ -1.38
CPNE3-213ENST00000622183 PROSER1Q86XN7 944 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CCAR1Q8IX12 1150 aaKnown RBP6.44□□□□□ -1.38
CPNE3-213ENST00000622183 CPA5Q8WXQ8 436 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 EAF2Q96CJ1 260 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-213ENST00000622183 AIFM3Q96NN9 605 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 UCKL1Q9NWZ5 548 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 NUMBLQ9Y6R0 609 aa6.44□□□□□ -1.38
CPNE3-213ENST00000622183 ST20-MTHFSA0A0A6YYL1 179 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 CAND2O75155 1236 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 IL33O95760 270 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 MAP4K4O95819 1239 aaPredicted RBP6.43□□□□□ -1.38
CPNE3-213ENST00000622183 GLI1P08151 1106 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 ENO2P09104 434 aaPredicted RBP6.43□□□□□ -1.38
CPNE3-213ENST00000622183 GP2P55259 537 aaKnown RBP6.43□□□□□ -1.38
CPNE3-213ENST00000622183 ADCY2Q08462 1091 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 GTF2H3Q13889 308 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 TOR2AQ5JU69 321 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 PRAMEF9Q5VWM5 478 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 TMC6Q7Z403 805 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 CALML6Q8TD86 181 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 RSAD2Q8WXG1 361 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 DDX11Q96FC9 970 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 AMNQ9BXJ7 453 aa6.43□□□□□ -1.38
CPNE3-213ENST00000622183 QRSL1Q9H0R6 528 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms