RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 TRIM50Q86XT4 487 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 KIAA0895Q8NCT3 520 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 TRIB2Q92519 343 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 SH2D3AQ9BRG2 576 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 CTNND2Q9UQB3 1225 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
CPNE3-212ENST00000621783 FAM13AO94988 1023 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 STAT5BP51692 787 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 NPEPPSP55786 919 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 TNFAIP2Q03169 654 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 STK4Q13043 487 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 MAPK7Q13164 816 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 FAM26FQ5R3K3 315 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 MFSD14CQ5VZR4 134 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 TRMT44Q8IYL2 757 aaKnown RBP11.83□□□□□ -0.52
CPNE3-212ENST00000621783 PPTC7Q8NI37 304 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 AFG1LQ8WV93 481 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 LENG1Q96BZ8 264 aaPredicted RBP11.83□□□□□ -0.52
CPNE3-212ENST00000621783 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 GTPBP4Q9BZE4 634 aaKnown RBP11.83□□□□□ -0.52
CPNE3-212ENST00000621783 ZHX3Q9H4I2 956 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 NRBP1Q9UHY1 535 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 ODF2LQ9ULJ1 636 aa11.83□□□□□ -0.52
CPNE3-212ENST00000621783 MYH9P35579 1960 aaKnown RBP11.82□□□□□ -0.52
CPNE3-212ENST00000621783 BECN2A8MW95 431 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 GOLGA6L19H0YKK7 550 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 IKBKBO14920 756 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 FKTNO75072 461 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 HIP1RO75146 1068 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 LGALS2P05162 132 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 MMP3P08254 477 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 CYBAP13498 195 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 GAP43P17677 238 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 ERCC5P28715 1186 aaPredicted RBP11.82□□□□□ -0.52
CPNE3-212ENST00000621783 PRCPP42785 496 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 ZNF131P52739 623 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 MYL5Q02045 173 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 PSMD2Q13200 908 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 NCAPHQ15003 741 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 UVSSAQ2YD98 709 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 CT47A1Q5JQC4 288 aaPredicted RBP11.82□□□□□ -0.52
CPNE3-212ENST00000621783 ADSSL1Q8N142 457 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 GLIS3Q8NEA6 775 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 ZNF296Q8WUU4 475 aaPredicted RBP11.82□□□□□ -0.52
CPNE3-212ENST00000621783 GLG1Q92896 1179 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 TIPINQ9BVW5 301 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 FGFBP2Q9BYJ0 223 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 SLC39A2Q9NP94 309 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 CYP26B1Q9NR63 512 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 MAPK8IP1Q9UQF2 711 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 GNEQ9Y223 722 aaKnown RBP11.82□□□□□ -0.52
CPNE3-212ENST00000621783 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
CPNE3-212ENST00000621783 SMTNL1A8MU46 457 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 ZNF286BP0CG31 522 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 HOXD8P13378 290 aaPredicted RBP11.81□□□□□ -0.52
CPNE3-212ENST00000621783 AKR1A1P14550 325 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 MARK3P27448 753 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 HOXD10P28358 340 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 PPP1R2P41236 205 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 STX17P56962 302 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 TRIM32Q13049 653 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 PAK1Q13153 545 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 STIM1Q13586 685 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 PLCB4Q15147 1175 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
CPNE3-212ENST00000621783 MAEAQ7L5Y9 396 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 PLPPR4Q7Z2D5 763 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 TLK2Q86UE8 772 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 DAW1Q8N136 415 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 ATP8B4Q8TF62 1192 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 NELFBQ8WX92 580 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 MED15Q96RN5 788 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
CPNE3-212ENST00000621783 SMARCAD1Q9H4L7 1026 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 PARVGQ9HBI0 331 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 POLD4Q9HCU8 107 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 TBC1D7Q9P0N9 293 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 FAM184BQ9ULE4 1060 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 COL4A3BPQ9Y5P4 624 aa11.81□□□□□ -0.52
CPNE3-212ENST00000621783 SFI1A8K8P3 1242 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 PSMA7O14818 248 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 DGAT1O75907 488 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 GNRH1P01148 92 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 ELNP15502 786 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 SLC26A2P50443 739 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 C1QTNF8P60827 252 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
CPNE3-212ENST00000621783 EMC2Q15006 297 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms