RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ARHGAP45Q92619 1136 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 EAF2Q96CJ1 260 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CEP95Q96GE4 821 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF558Q96NG5 402 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 BBC3Q96PG8 261 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 TAAR1Q96RJ0 339 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 RMDN3Q96TC7 470 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 API5Q9BZZ5 524 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 FOXQ1Q9C009 403 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 TMEM117Q9H0C3 514 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ARMT1Q9H993 441 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 SFXN1Q9H9B4 322 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MLXIPQ9HAP2 919 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ATP6V0A4Q9HBG4 840 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 LTB4R2Q9NPC1 389 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 TMEM161AQ9NX61 479 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ARPP21Q9UBL0 812 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CDH22Q9UJ99 828 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 DBNLQ9UJU6 430 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 PADI3Q9ULW8 664 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MTF2Q9Y483 593 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 RAI2Q9Y5P3 530 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MRVI1Q9Y6F6 885 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 SMG1Q96Q15 3661 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MYH2Q9UKX2 1941 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 IGSF10Q6WRI0 2623 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CDK5RAP2Q96SN8 1893 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 SCN10AQ9Y5Y9 1956 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GBF1Q92538 1859 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 IGSF9BQ9UPX0 1349 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SPEF2Q9C093 1822 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 CCDC195A0A1B0GUA6 201 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TBKBP1A7MCY6 615 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GSG1L2A8MUP6 293 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 UPK3BL1B0FP48 263 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 UPK3BL2E5RIL1 263 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 J3QKU1 62 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GPR182O15218 404 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ARHGAP6O43182 974 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 MAP3K13O43283 966 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 LRRN2O75325 713 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SURF6O75683 361 aaKnown RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 STAM2O75886 525 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 CSPG5O95196 566 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GGPS1O95749 300 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 LGALS2P05162 132 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF286BP0CG31 522 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TSPY3P0CV98 308 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TSPY8P0CW00 308 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PLA2G2AP14555 144 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 EPCAMP16422 314 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PDE4AP27815 886 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 CD52P31358 61 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GBP2P32456 591 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ADD2P35612 726 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 RAP1GAPP47736 663 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 NOVA1P51513 510 aaKnown RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TFAP4Q01664 338 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SP2Q02086 613 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GHRHRQ02643 423 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SRSF1Q07955 248 aaKnown RBP eCLIP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 FOXC1Q12948 553 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 MTAPQ13126 283 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 HTR4Q13639 388 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 NEDD9Q14511 834 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 UBXN2BQ14CS0 331 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 MLF2Q15773 248 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 AASDHQ4L235 1098 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PAN2Q504Q3 1202 aaKnown RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 MARCH8Q5T0T0 291 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SYDE2Q5VT97 1194 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ARHGEF16Q5VV41 709 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ZSCAN25Q6NSZ9 544 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PSAPL1Q6NUJ1 521 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 KANK3Q6NY19 840 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PDXDC1Q6P996 788 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 C19orf48Q6RUI8 117 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TSSK4Q6SA08 328 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SLC30A10Q6XR72 485 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 LRRC55Q6ZSA7 311 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 STOX1Q6ZVD7 989 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 KCTD1Q719H9 257 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 LONP2Q86WA8 852 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 GPR65Q8IYL9 337 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 VPS52Q8N1B4 723 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF687Q8N1G0 1237 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SLC39A11Q8N1S5 342 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SPEM1Q8N4L4 309 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SSH3Q8TE77 659 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 DCAF4Q8WV16 495 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 LINC01599Q8WXQ3 324 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 BBXQ8WY36 941 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ZC3H10Q96K80 434 aaKnown RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TTC14Q96N46 770 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 CASD1Q96PB1 797 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 UBL7Q96S82 380 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 STRBPQ96SI9 672 aaKnown RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 MEIS3Q99687 375 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SENP7Q9BQF6 1050 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 EMILIN2Q9BXX0 1053 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms