RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 STAG3L1P0CL83 205 aa27.16■■□□□ 1.94
ATXN3-253ENST00000621269 BMPR1AP36894 532 aa27.16■■□□□ 1.94
ATXN3-253ENST00000621269 NFX1Q12986 1120 aaKnown RBP27.16■■□□□ 1.94
ATXN3-253ENST00000621269 NPAS4Q8IUM7 802 aa27.16■■□□□ 1.94
ATXN3-253ENST00000621269 TBCKQ8TEA7 893 aa27.16■■□□□ 1.94
ATXN3-253ENST00000621269 C11orf84Q9BUA3 381 aaPredicted RBP27.16■■□□□ 1.94
ATXN3-253ENST00000621269 UBE2ZQ9H832 354 aaPredicted RBP27.16■■□□□ 1.94
ATXN3-253ENST00000621269 RC3H2Q9HBD1 1191 aaKnown RBP27.16■■□□□ 1.94
ATXN3-253ENST00000621269 C5orf67F2Z3F1 127 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 MSH4O15457 936 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 TMEM266Q2M3C6 531 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 ODR4Q5SWX8 454 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 FAM43BQ6ZT52 329 aaPredicted RBP27.15■■□□□ 1.94
ATXN3-253ENST00000621269 METTL13Q8N6R0 699 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 BANK1Q8NDB2 785 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 FAM167AQ96KS9 214 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 RIT2Q99578 217 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 DISC1Q9NRI5 854 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 LRFN2Q9ULH4 789 aa27.15■■□□□ 1.94
ATXN3-253ENST00000621269 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.14■■□□□ 1.94
ATXN3-253ENST00000621269 GAS7O60861 476 aa27.14■■□□□ 1.94
ATXN3-253ENST00000621269 RPS6KA5O75582 802 aa27.14■■□□□ 1.94
ATXN3-253ENST00000621269 C22orf31O95567 290 aa27.14■■□□□ 1.94
ATXN3-253ENST00000621269 BLIDQ8IZY5 108 aa27.14■■□□□ 1.94
ATXN3-253ENST00000621269 FAM177A1Q8N128 213 aaPredicted RBP27.14■■□□□ 1.94
ATXN3-253ENST00000621269 PPP4R2Q9NY27 417 aa27.14■■□□□ 1.94
ATXN3-253ENST00000621269 SFNP31947 248 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 LRCH2Q5VUJ6 765 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 GALNT17Q6IS24 598 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 SLC5A5Q92911 643 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 CLP1Q92989 425 aaKnown RBP27.13■■□□□ 1.93
ATXN3-253ENST00000621269 TEKT3Q9BXF9 490 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 TMX1Q9H3N1 280 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 NSUN3Q9H649 340 aaKnown RBP27.13■■□□□ 1.93
ATXN3-253ENST00000621269 CDHR5Q9HBB8 845 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 NRBP2Q9NSY0 501 aa27.13■■□□□ 1.93
ATXN3-253ENST00000621269 NOC2LQ9Y3T9 749 aaKnown RBP27.13■■□□□ 1.93
ATXN3-253ENST00000621269 GPR182O15218 404 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 MAGEB2O15479 319 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 CHMP2AO43633 222 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 EDIL3O43854 480 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 CDKL5O76039 1030 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 KCNA5P22460 613 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 CRYBB1P53674 252 aaPredicted RBP27.12■■□□□ 1.93
ATXN3-253ENST00000621269 CMTR2Q8IYT2 770 aaKnown RBP27.12■■□□□ 1.93
ATXN3-253ENST00000621269 CRIPAKQ8N1N5 446 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 PPP1R16BQ96T49 567 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 LMAN2LQ9H0V9 348 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 ERVK-5Q9HDB9 667 aa27.12■■□□□ 1.93
ATXN3-253ENST00000621269 RNF216Q9NWF9 866 aaPredicted RBP27.12■■□□□ 1.93
ATXN3-253ENST00000621269 RALGAPA2Q2PPJ7 1873 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 DENND3A2RUS2 1198 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 LINC00271P0C7V0 271 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 IBSPP21815 317 aaPredicted RBP27.11■■□□□ 1.93
ATXN3-253ENST00000621269 JAK3P52333 1124 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 KIZQ2M2Z5 673 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 Q4G0T1 1027 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 TCEAL5Q5H9L2 206 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 DAGLBQ8NCG7 672 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 PLVAPQ9BX97 442 aa27.11■■□□□ 1.93
ATXN3-253ENST00000621269 TCF20Q9UGU0 1960 aaKnown RBP27.1■■□□□ 1.93
ATXN3-253ENST00000621269 VTNP04004 478 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 OATP04181 439 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 TMOD1P28289 359 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 SARSP49591 514 aaKnown RBP27.1■■□□□ 1.93
ATXN3-253ENST00000621269 LEXMQ3ZCV2 418 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 TMEM40Q8WWA1 233 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 AIFM3Q96NN9 605 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 MAP7D2Q96T17 732 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 OSMRQ99650 979 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 SLKQ9H2G2 1235 aaPredicted RBP27.1■■□□□ 1.93
ATXN3-253ENST00000621269 UNC45AQ9H3U1 944 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 ST3GAL5Q9UNP4 418 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 PCDHB7Q9Y5E2 793 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 NLRC5Q86WI3 1866 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 TTC28Q96AY4 2481 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 MUC3AQ02505 3323 aa27.1■■□□□ 1.93
ATXN3-253ENST00000621269 CYP3A7-CYP3A51PA0A087WV96 503 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 GRM6O15303 877 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 CYP3A7P24462 503 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 NONOQ15233 471 aaKnown RBP eCLIP27.09■■□□□ 1.93
ATXN3-253ENST00000621269 PAN2Q504Q3 1202 aaKnown RBP27.09■■□□□ 1.93
ATXN3-253ENST00000621269 EFCAB12Q6NXP0 572 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 ADAM2Q99965 735 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 C1orf112Q9NSG2 853 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 AKT3Q9Y243 479 aa27.09■■□□□ 1.93
ATXN3-253ENST00000621269 MRPL42Q9Y6G3 142 aaKnown RBP27.09■■□□□ 1.93
ATXN3-253ENST00000621269 TTC3P53804 2025 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 M0R2N6 131 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 GPR32O75388 356 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 TDP2O95551 362 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 CLCN3P51790 818 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 PRKCEQ02156 737 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 SCRN1Q12765 414 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 EP400NLQ6ZTU2 488 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 MIER3Q7Z3K6 550 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 KRT25Q7Z3Z0 450 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 GJA10Q969M2 543 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 RGS18Q9NS28 235 aa27.08■■□□□ 1.93
ATXN3-253ENST00000621269 ZNF862O60290 1169 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms