RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 N4BP3O15049 544 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 IREB2P48200 963 aaKnown RBP12.53□□□□□ -0.4
TP53-226ENST00000620739 NCBP1Q09161 790 aaKnown RBP12.53□□□□□ -0.4
TP53-226ENST00000620739 STIM1Q13586 685 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 ERMNQ8TAM6 284 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 HOXC10Q9NYD6 342 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 RNF225M0QZC1 329 aaPredicted RBP12.53□□□□□ -0.4
TP53-226ENST00000620739 SMAPO00193 183 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SETSIPP0DME0 302 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
TP53-226ENST00000620739 CCNE1P24864 410 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 PPP2R5CQ13362 524 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 GIT2Q14161 759 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 ARMC3Q5W041 872 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SPECC1LQ69YQ0 1117 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 SYT2Q8N9I0 419 aaPredicted RBP12.53□□□□□ -0.4
TP53-226ENST00000620739 CCDC26Q8TAB7 109 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
TP53-226ENST00000620739 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 TEX13BQ9BXU2 312 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 EHMT1Q9H9B1 1298 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 FAM53CQ9NYF3 392 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 UBIAD1Q9Y5Z9 338 aa12.53□□□□□ -0.4
TP53-226ENST00000620739 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.4
TP53-226ENST00000620739 MAEAQ7L5Y9 396 aa12.52□□□□□ -0.4
TP53-226ENST00000620739 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.4
TP53-226ENST00000620739 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.4
TP53-226ENST00000620739 DHTKD1Q96HY7 919 aaPredicted RBP12.52□□□□□ -0.4
TP53-226ENST00000620739 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.4
TP53-226ENST00000620739 CYP39A1Q9NYL5 469 aa12.52□□□□□ -0.4
TP53-226ENST00000620739 RABGAP1Q9Y3P9 1069 aa12.52□□□□□ -0.4
TP53-226ENST00000620739 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.4
TP53-226ENST00000620739 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 RGS20O76081 388 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 NR3C2P08235 984 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 COPB1P53618 953 aaKnown RBP12.52□□□□□ -0.41
TP53-226ENST00000620739 SP4Q02446 784 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 GHRHRQ02643 423 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 FAM26FQ5R3K3 315 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 CENPPQ6IPU0 288 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 B3GNT9Q6UX72 402 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 OPTNQ96CV9 577 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 SLX1AQ9BQ83 275 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
TP53-226ENST00000620739 JADE2Q9NQC1 790 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 ST7Q9NRC1 585 aa12.52□□□□□ -0.41
TP53-226ENST00000620739 GSDMDP57764 484 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 RBL2Q08999 1139 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
TP53-226ENST00000620739 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 TC2NQ8N9U0 490 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 LXNQ9BS40 222 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 POLR3CQ9BUI4 534 aaPredicted RBP12.51□□□□□ -0.41
TP53-226ENST00000620739 TEKT3Q9BXF9 490 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
TP53-226ENST00000620739 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
TP53-226ENST00000620739 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
TP53-226ENST00000620739 ASTN1O14525 1302 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 PHIPQ8WWQ0 1821 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 BRCA2P51587 3418 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 RLFQ13129 1914 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 GJA5P36382 358 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 PBX1P40424 430 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 ERO1BQ86YB8 467 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 MIEF2Q96C03 454 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 C16orf45Q96MC5 204 aaPredicted RBP12.51□□□□□ -0.41
TP53-226ENST00000620739 TXNRD2Q9NNW7 524 aa12.51□□□□□ -0.41
TP53-226ENST00000620739 CARNS1A5YM72 827 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 B4DLN1 442 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 CCNE2O96020 404 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 MAGEA9P43362 315 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 KLK7P49862 253 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 FXR1P51114 621 aaKnown RBP eCLIP12.5□□□□□ -0.41
TP53-226ENST00000620739 UBXN1Q04323 297 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 CCDC15Q0P6D6 951 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 UGCGQ16739 394 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 Q3C1V9 767 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 VSIG10LQ86VR7 867 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
TP53-226ENST00000620739 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
TP53-226ENST00000620739 SPTLC3Q9NUV7 552 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 FDX1P10109 184 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 MYBP10242 640 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 NF2P35240 595 aa12.5□□□□□ -0.41
TP53-226ENST00000620739 PPATQ06203 517 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms