RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PKN1Q16512 942 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 EPC2Q52LR7 807 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 NIPA1Q7RTP0 329 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 SP7Q8TDD2 431 aaPredicted RBP18.19■□□□□ 0.5
CD40-207ENST00000620709 ZMYND12Q9H0C1 365 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 MUC3AQ02505 3323 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 IPO5O00410 1097 aaKnown RBP18.18■□□□□ 0.5
CD40-207ENST00000620709 BMP1P13497 986 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 GNA11P29992 359 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
CD40-207ENST00000620709 GPM6BQ13491 265 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 SWSAP1Q6NVH7 229 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 MIS18BP1Q6P0N0 1132 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 TMEM192Q8IY95 271 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 CKAP2LQ8IYA6 745 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 SAMD11Q96NU1 681 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 ZNF302Q9NR11 478 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 VPS54Q9P1Q0 977 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 GINS2Q9Y248 185 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 PCDHA2Q9Y5H9 948 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 TRPV2Q9Y5S1 764 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 ESYT2A0FGR8 921 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 ENPP3O14638 875 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 PTMSP20962 102 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 PRR16Q569H4 304 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 MCTP2Q6DN12 878 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 PDXDC2PQ6P474 469 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 MTHFD1LQ6UB35 978 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 WASF1Q92558 559 aa18.18■□□□□ 0.5
CD40-207ENST00000620709 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
CD40-207ENST00000620709 IGLV3-22A0A075B6J6 115 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 ATG7O95352 703 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 RPLP2P05387 115 aaKnown RBP18.17■□□□□ 0.5
CD40-207ENST00000620709 CYP3A4P08684 503 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 KLRC1P26715 233 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 CTNNB1P35222 781 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 PAK2Q13177 524 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 PTPROQ16827 1216 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 CCDC60Q8IWA6 550 aaPredicted RBP18.17■□□□□ 0.5
CD40-207ENST00000620709 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 BICD2Q8TD16 824 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 C8orf76Q96K31 380 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 SAMM50Q9Y512 469 aa18.17■□□□□ 0.5
CD40-207ENST00000620709 HBP1O60381 514 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 CSPG5O95196 566 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 SLC26A2P50443 739 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 NLRP5P59047 1200 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 SETQ01105 290 aaPredicted RBP18.16■□□□□ 0.5
CD40-207ENST00000620709 KRT76Q01546 638 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 EP400NLQ6ZTU2 488 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 RNF26Q9BY78 433 aaPredicted RBP18.16■□□□□ 0.5
CD40-207ENST00000620709 CELF4Q9BZC1 486 aaKnown RBP18.16■□□□□ 0.5
CD40-207ENST00000620709 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 LOXHD1Q8IVV2 1947 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 BDP1A6H8Y1 2624 aa18.16■□□□□ 0.5
CD40-207ENST00000620709 DHX15O43143 795 aaKnown RBP18.15■□□□□ 0.5
CD40-207ENST00000620709 FOSBP53539 338 aa18.15■□□□□ 0.5
CD40-207ENST00000620709 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
CD40-207ENST00000620709 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
CD40-207ENST00000620709 ATP8B4Q8TF62 1192 aa18.15■□□□□ 0.5
CD40-207ENST00000620709 MRPL38Q96DV4 380 aaKnown RBP18.15■□□□□ 0.5
CD40-207ENST00000620709 TBC1D22BQ9NU19 505 aa18.15■□□□□ 0.5
CD40-207ENST00000620709 IGKV6D-21A0A0A0MT36 114 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 SMIM35A0A1B0GVV1 85 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 H3BNC9 293 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 DEXIO95424 95 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 NFX1Q12986 1120 aaKnown RBP18.14■□□□□ 0.49
CD40-207ENST00000620709 MCTP1Q6DN14 999 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 NME8Q8N427 588 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 CRYGNQ8WXF5 182 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 ZSCAN16Q9H4T2 348 aaPredicted RBP18.14■□□□□ 0.49
CD40-207ENST00000620709 UBE2ZQ9H832 354 aaPredicted RBP18.14■□□□□ 0.49
CD40-207ENST00000620709 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 ADGRA3Q8IWK6 1321 aa18.14■□□□□ 0.49
CD40-207ENST00000620709 PSAPP07602 524 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 KCNA5P22460 613 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 ZNF484Q5JVG2 852 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 METTL13Q8N6R0 699 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 FBXO18Q8NFZ0 1043 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 FTHL17Q9BXU8 183 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 GABBR1Q9UBS5 961 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 NCOR1O75376 2440 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 RESTQ13127 1097 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 TRIM29Q14134 588 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 PAN2Q504Q3 1202 aaKnown RBP18.13■□□□□ 0.49
CD40-207ENST00000620709 ZNF746Q6NUN9 644 aaPredicted RBP18.13■□□□□ 0.49
CD40-207ENST00000620709 RTN4RL1Q86UN2 441 aaPredicted RBP18.13■□□□□ 0.49
CD40-207ENST00000620709 BANK1Q8NDB2 785 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 LRFN2Q9ULH4 789 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 PCDHA10Q9Y5I2 948 aa18.13■□□□□ 0.49
CD40-207ENST00000620709 MYH9P35579 1960 aaKnown RBP18.12■□□□□ 0.49
CD40-207ENST00000620709 EVPLQ92817 2033 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms