RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 APOL6Q9BWW8 343 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 CNNM2Q9H8M5 875 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 PCF11O94913 1555 aaKnown RBP5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ATP5JP18859 108 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 RPS6KA2Q15349 733 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 GDPD5Q8WTR4 605 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 MCM9Q9NXL9 1143 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 PLCB4Q15147 1175 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 RABGAP1LQ5R372 815 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF483Q8TF39 744 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ADAMTS1Q9UHI8 967 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 TLK1Q9UKI8 766 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 PDE2AO00408 941 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-214ENST00000620676 MARK3P27448 753 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 RALGAPBQ86X10 1494 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 CLIC2O15247 247 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 GLI1P08151 1106 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 GRK2P25098 689 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 CRNKL1Q9BZJ0 848 aaKnown RBP5.4□□□□□ -1.54
VPS13D-214ENST00000620676 IL1RL2Q9HB29 575 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 BTBD7Q9P203 1132 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 CARMIL2Q6F5E8 1435 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ATP5HO75947 161 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ACTN1P12814 892 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 AKR1B1P15121 316 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ADCK1Q86TW2 530 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ITFG2Q969R8 447 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 FAM81BQ96LP2 452 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 TMEM120BA0PK00 339 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 PEX1O43933 1283 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 ENTPD5O75356 428 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 BBS9Q3SYG4 887 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 LIN9Q5TKA1 542 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 CLEC4GQ6UXB4 293 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-214ENST00000620676 TPH2Q8IWU9 490 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 HNRNPLLQ8WVV9 542 aaKnown RBP5.4□□□□□ -1.54
VPS13D-214ENST00000620676 UBE4BO95155 1302 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 SERPINI2O75830 405 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 CBX6O95503 412 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 SERPING1P05155 500 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 PLCG1P19174 1290 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 SPARCL1Q14515 664 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 PRPF39Q86UA1 669 aaKnown RBP5.4□□□□□ -1.55
VPS13D-214ENST00000620676 CCDC84Q86UT8 332 aaPredicted RBP5.4□□□□□ -1.55
VPS13D-214ENST00000620676 SELENONQ9NZV5 590 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 ZBED6P86452 979 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 KRT17Q04695 432 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 SWT1Q5T5J6 900 aaKnown RBP5.4□□□□□ -1.55
VPS13D-214ENST00000620676 IZUMO2Q6UXV1 221 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 INPP5DQ92835 1189 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 P2RX5Q93086 422 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 HACD3Q9P035 362 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 C6orf203Q9P0P8 240 aaPredicted RBP5.4□□□□□ -1.55
VPS13D-214ENST00000620676 MEIS1O00470 390 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 P4HA2O15460 535 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 EPHB2P29323 1055 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 PPP1R15BQ5SWA1 713 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 UCMAQ8WVF2 138 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 GRIP2Q9C0E4 1043 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 CAAP1Q9H8G2 361 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 FAM205CA6NFA0 338 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 LGALS16A8MUM7 142 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 GSTA4O15217 222 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 ELOA2Q8IYF1 753 aaPredicted RBP5.4□□□□□ -1.55
VPS13D-214ENST00000620676 SNX29Q8TEQ0 813 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 MAP4K1Q92918 833 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 ITIH6Q6UXX5 1313 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 PIK3R2O00459 728 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 ESRRBO95718 433 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 KRT8P05787 483 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 GOLGA8HP0CJ92 632 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 WDR60Q8WVS4 1066 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 BPIFA3Q9BQP9 254 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 CUEDC2Q9H467 287 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 CCPG1Q9ULG6 757 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 TELO2Q9Y4R8 837 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 THOC2Q8NI27 1593 aaKnown RBP5.4□□□□□ -1.55
VPS13D-214ENST00000620676 EXOC3O60645 756 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 P4HA1P13674 534 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 GALNT17Q6IS24 598 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 C17orf50Q8WW18 174 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 CEP19Q96LK0 163 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 HAUS8Q9BT25 410 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 V9GYQ6 96 aa5.4□□□□□ -1.55
VPS13D-214ENST00000620676 PERM1Q5SV97 790 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 PDCD6IPQ8WUM4 868 aaKnown RBP5.39□□□□□ -1.55
VPS13D-214ENST00000620676 SH3GL2Q99962 352 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 FUCA2Q9BTY2 467 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 TRABDQ9H4I3 376 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 MKL2Q9ULH7 1088 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 ANGPTL3Q9Y5C1 460 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 RSPH10B2B2RC85 870 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 RSPH10BP0C881 870 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 ITGADQ13349 1161 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 PROSER3Q2NL68 480 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 PIGOQ8TEQ8 1089 aa5.39□□□□□ -1.55
VPS13D-214ENST00000620676 LENG1Q96BZ8 264 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-214ENST00000620676 GOLGA8JA6NMD2 632 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms