RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 AARSP49588 968 aaKnown RBP eCLIP3.31□□□□□ -1.88
NEB-220ENST00000618972 RAP1GDS1P52306 607 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 SKOR1P84550 965 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 BIRC2Q13490 618 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MED21Q13503 144 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 N4BP2L2Q92802 583 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 ARHGEF11O15085 1522 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MAGEA13PA6NCF6 341 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 AXIN1O15169 862 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ADD2P35612 726 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ILF2Q12905 390 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 CNNM4Q6P4Q7 775 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MKNK2Q9HBH9 465 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MPP4Q96JB8 637 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 FAM84BQ96KN1 310 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 FAM167BQ9BTA0 163 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 RBM12Q9NTZ6 932 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 MAGEB6P1A0A0J9YX57 407 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 FOSP01100 380 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 MCF2P10911 925 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TUBA1BP68363 451 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TUBA1AQ71U36 451 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 OPTNQ96CV9 577 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 AGAP3Q96P47 875 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ATP6V0A4Q9HBG4 840 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TCRBV7S2A1N4TA0A589 114 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PABPN1LA6NDY0 278 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 DCDC2CA8MYV0 355 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 KLHL41O60662 606 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 KRT27Q7Z3Y8 459 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ALKBH8Q96BT7 664 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 ADGRL2O95490 1459 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 KDM6BO15054 1643 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TMCC1O94876 653 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 LCA5LO95447 670 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 EIF1ADQ8N9N8 165 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 APPBP2Q92624 585 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PHLPP2Q6ZVD8 1323 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 GOLGA8JA6NMD2 632 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 STX2P32856 288 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 CA8P35219 290 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 CTNNA1P35221 906 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 DEFA1P59665 94 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 DEFA3P59666 94 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ABCE1P61221 599 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 AP1B1Q10567 949 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 RAPGEF5Q92565 580 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TPD52L2O43399 206 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 BAG3O95817 575 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 GFPT1Q06210 699 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 NNTQ13423 1086 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TADA1Q96BN2 335 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 VIL1P09327 827 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 LIN9Q5TKA1 542 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ARMC3Q5W041 872 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 DZIP3Q86Y13 1208 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 CYP2W1Q8TAV3 490 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TUBGCP3Q96CW5 907 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 DNM1LO00429 736 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 EIF2B5Q13144 721 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 FSCBQ5H9T9 825 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 IFNL2Q8IZJ0 200 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 RBBP8NLQ8NC74 664 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 GID8Q9NWU2 228 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ORC6Q9Y5N6 252 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 CCT8L1PA6NM43 557 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 GIPC1O14908 333 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 CBFA2T3O75081 653 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TSPAN9O75954 239 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 GSNP06396 782 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ADCY8P40145 1251 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PSMD2Q13200 908 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 KBTBD12Q3ZCT8 623 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 NOSTRINQ8IVI9 506 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 SELENOSQ9BQE4 189 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 IRAK4Q9NWZ3 460 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MBD5Q9P267 1494 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 AGRPO00253 132 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ASIC1P78348 528 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 WDR75Q8IWA0 830 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 PM20D2Q8IYS1 436 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TBC1D23Q9NUY8 699 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 KIAA0232Q92628 1395 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 MAGI3Q5TCQ9 1506 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 STK10O94804 968 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 PSEN1P49768 467 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 TTC38Q5R3I4 469 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SHQ1Q6PI26 577 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 SV2BQ7L1I2 683 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 DSCC1Q9BVC3 393 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 HPCAL4Q9UM19 191 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ZNF839A8K0R7 811 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 TRAF5O00463 557 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 DDR1Q08345 913 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 AGGF1Q8N302 714 aaeCLIP3.3□□□□□ -1.88
NEB-220ENST00000618972 SEPT1Q8WYJ6 367 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 JDP2Q8WYK2 163 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FAM129AQ9BZQ8 928 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 NHEJ1Q9H9Q4 299 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 FAM8A1Q9UBU6 413 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms