RNA–Protein interactions for RNA: ENST00000618229.4

SURF4-209, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-209ENST00000618229 USP17L6PQ6QN14 398 aa17.84■□□□□ 0.45
SURF4-209ENST00000618229 CCDC65Q8IXS2 484 aa17.84■□□□□ 0.45
SURF4-209ENST00000618229 SLC17A8Q8NDX2 589 aa17.84■□□□□ 0.45
SURF4-209ENST00000618229 CUL5Q93034 780 aa17.84■□□□□ 0.45
SURF4-209ENST00000618229 MRRFQ96E11 262 aaKnown RBP17.84■□□□□ 0.45
SURF4-209ENST00000618229 MYH7BA7E2Y1 1941 aa17.84■□□□□ 0.45
SURF4-209ENST00000618229 GALCP54803 685 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 SEPT14Q6ZU15 432 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 VPS36Q86VN1 386 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.45
SURF4-209ENST00000618229 C18orf8Q96DM3 657 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 RIC8AQ9NPQ8 531 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 GCNT4Q9P109 453 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 TAF1P21675 1872 aa17.83■□□□□ 0.45
SURF4-209ENST00000618229 UBOX5O94941 541 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 XRCC5P13010 732 aaKnown RBP17.83■□□□□ 0.44
SURF4-209ENST00000618229 SLC8A1P32418 973 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 TNIP1Q15025 636 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 TTBK2Q6IQ55 1244 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 SCFD2Q8WU76 684 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 SCFD1Q8WVM8 642 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 PBKQ96KB5 322 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 FGFR1OP2Q9NVK5 253 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 SWAP70Q9UH65 585 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 DUOX1Q9NRD9 1551 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 TRIP13Q15645 432 aaPredicted RBP17.83■□□□□ 0.44
SURF4-209ENST00000618229 ZNF746Q6NUN9 644 aaPredicted RBP17.83■□□□□ 0.44
SURF4-209ENST00000618229 IQCDQ96DY2 449 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 AGAP1Q9UPQ3 857 aa17.83■□□□□ 0.44
SURF4-209ENST00000618229 PALM3A6NDB9 673 aaPredicted RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 CREB1P16220 341 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 PMS2P54278 862 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 RPS8P62241 208 aaKnown RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 IFI16Q16666 785 aaKnown RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 LONRF1Q17RB8 773 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 TBC1D10BQ4KMP7 808 aaPredicted RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 NUGGCQ68CJ6 796 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 LRIG3Q6UXM1 1119 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 AGAP11Q8TF27 550 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 STK17AQ9UEE5 414 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 FER1L4A9Z1Z3 1794 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 TAL1P17542 331 aaPredicted RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 RASA1P20936 1047 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 YIPF3Q9GZM5 350 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 NUCKS1Q9H1E3 243 aaKnown RBP17.82■□□□□ 0.44
SURF4-209ENST00000618229 GLI3P10071 1580 aa17.82■□□□□ 0.44
SURF4-209ENST00000618229 RSPH10B2B2RC85 870 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 CLGNO14967 610 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 KIF1CO43896 1103 aaKnown RBP17.81■□□□□ 0.44
SURF4-209ENST00000618229 CAMTA2O94983 1202 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 GCNT3O95395 438 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 RSPH10BP0C881 870 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 CDK8P49336 464 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 TRIM59Q8IWR1 403 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 SLC35G2Q8TBE7 412 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 KLHL29Q96CT2 875 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 MYH1P12882 1939 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 MYH4Q9Y623 1939 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 FGRP09769 529 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 PSMC6P62333 389 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 SNX1Q13596 522 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 INTS5Q6P9B9 1019 aaKnown RBP17.81■□□□□ 0.44
SURF4-209ENST00000618229 IRF2BP2Q7Z5L9 587 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 NEK9Q8TD19 979 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 DNAJC19Q96DA6 116 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 KIF9Q9HAQ2 790 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.81■□□□□ 0.442e-10■■■■□ 22.3
SURF4-209ENST00000618229 PNMA3Q9UL41 463 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 TCP11X1B4DZS4 312 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.449e-7■■□□□ 13.8
SURF4-209ENST00000618229 MYBP10242 640 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 CCNHP51946 323 aaPredicted RBP17.81■□□□□ 0.44
SURF4-209ENST00000618229 HOOK3Q86VS8 718 aa17.81■□□□□ 0.44
SURF4-209ENST00000618229 PLCB4Q15147 1175 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 FAM47EQ6ZV65 393 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 TRPM8Q7Z2W7 1104 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 PHLDB2Q86SQ0 1253 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 SFR1Q86XK3 245 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 ECT2Q9H8V3 914 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 ZNF804BA4D1E1 1349 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
SURF4-209ENST00000618229 PON1P27169 355 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 ITPK1Q13572 414 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 GALNT17Q6IS24 598 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 CCDC105Q8IYK2 499 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 CTNNBL1Q8WYA6 563 aaPredicted RBP17.8■□□□□ 0.44
SURF4-209ENST00000618229 POP1Q99575 1024 aaKnown RBP17.8■□□□□ 0.44
SURF4-209ENST00000618229 FAM129AQ9BZQ8 928 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 TAS2R14Q9NYV8 317 aa17.8■□□□□ 0.44
SURF4-209ENST00000618229 GOLGA6L10A0A0M3HER8 536 aa17.79■□□□□ 0.44
SURF4-209ENST00000618229 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
SURF4-209ENST00000618229 AFPP02771 609 aaKnown RBP17.79■□□□□ 0.44
SURF4-209ENST00000618229 MMP14P50281 582 aa17.79■□□□□ 0.44
SURF4-209ENST00000618229 DRP2Q13474 957 aa17.79■□□□□ 0.44
SURF4-209ENST00000618229 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms