RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 OTOP2Q7RTS6 562 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 RBM23Q86U06 439 aaKnown RBP11.86□□□□□ -0.51
POLR2A-209ENST00000617998 PDCD6IPQ8WUM4 868 aaKnown RBP11.86□□□□□ -0.51
POLR2A-209ENST00000617998 VTA1Q9NP79 307 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 ERLIN1O75477 346 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 ASMTLO95671 621 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 C12orf60Q5U649 245 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 CHMP6Q96FZ7 201 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 PRKCBP05771 671 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 PLD1Q13393 1074 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 TSC1Q92574 1164 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ZSWIM5Q9P217 1185 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 VEGFBP49765 207 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 IQSEC1Q6DN90 963 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 GPR142Q7Z601 462 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ITIH5Q86UX2 942 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ASIC4Q96FT7 647 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 PNMA5Q96PV4 448 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 METTL14Q9HCE5 456 aaKnown RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 BEX3Q00994 111 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 GPR75-ASB3A0A0A6YYF3 556 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 GHRP10912 638 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 TCF7P36402 384 aaPredicted RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 DCAF4L1Q3SXM0 396 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 PSRC1Q6PGN9 363 aaPredicted RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 MAP7D3Q8IWC1 876 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 PIGOQ8TEQ8 1089 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ZNF536O15090 1300 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 FAM47DPA6NHR8 397 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 FOXO4P98177 505 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 CXCL17Q6UXB2 119 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 SLITRK1Q96PX8 696 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 TINF2Q9BSI4 451 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 YIPF2Q9BWQ6 316 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ABCF3Q9NUQ8 709 aa11.85□□□□□ -0.51
POLR2A-209ENST00000617998 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
POLR2A-209ENST00000617998 ARL4AP40617 200 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 MFAP3P55082 362 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 MFSD10Q14728 455 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 TEX35Q5T0J7 233 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 ZNF558Q96NG5 402 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
POLR2A-209ENST00000617998 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 LAMC1P11047 1609 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 A8MXQ7 604 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 CKMP06732 381 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 TRAPPC10P48553 1259 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 ARMC6Q6NXE6 501 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 RWDD3Q9Y3V2 267 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 SNX14Q9Y5W7 946 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 SYCE3A1L190 88 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 PAK1Q13153 545 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 GSE1Q14687 1217 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 CLMNQ96JQ2 1002 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 A0A1W2PRG0 241 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 DSG3P32926 999 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 FAM81BQ96LP2 452 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 PPARGP37231 505 aaPredicted RBP11.84□□□□□ -0.51
POLR2A-209ENST00000617998 LARP4BQ92615 738 aaKnown RBP11.84□□□□□ -0.51
POLR2A-209ENST00000617998 BCL9O00512 1426 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 MAFGO15525 162 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 FOSL2P15408 326 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
POLR2A-209ENST00000617998 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 FAM20AQ96MK3 541 aa11.84□□□□□ -0.51
POLR2A-209ENST00000617998 TACC1O75410 805 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 SARNPP82979 210 aaKnown RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 ADAM9Q13443 819 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 XRRA1Q6P2D8 792 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 TTC23LQ6PF05 361 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 ACER1Q8TDN7 264 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 DYDC2Q96IM9 177 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 TNIP3Q96KP6 325 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 MRPS17Q9Y2R5 130 aaKnown RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 NMT2O60551 498 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 UBE2HP62256 183 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF699Q32M78 642 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 BHMT2Q9H2M3 363 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 TMEM260Q9NX78 707 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 LUC7L2Q9Y383 392 aaKnown RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 F13A1P00488 732 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 NSFP46459 744 aaKnown RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 PSEN2P49810 448 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 NFIAQ12857 509 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms