RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TTC3P53804 2025 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 DOCK5Q9H7D0 1870 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 SPTBN4Q9H254 2564 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 CFAP54Q96N23 3096 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 PER2O15055 1255 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 EPB41L2O43491 1005 aaKnown RBP9.76□□□□□ -0.85
GPC6-202ENST00000617456 CYTH3O43739 400 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 GLP2RO95838 553 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 ANTXR2P58335 489 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 TMEM62Q0P6H9 643 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 COASYQ13057 564 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 KRT32Q14532 448 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 SPOUT1Q5T280 376 aaKnown RBP9.76□□□□□ -0.85
GPC6-202ENST00000617456 TSHZ1Q6ZSZ6 1077 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 RTN4RL1Q86UN2 441 aaPredicted RBP9.76□□□□□ -0.85
GPC6-202ENST00000617456 NLRX1Q86UT6 975 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 NPAS4Q8IUM7 802 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 ZNF654Q8IZM8 581 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 GIMAP8Q8ND71 665 aaPredicted RBP9.76□□□□□ -0.85
GPC6-202ENST00000617456 SMARCC2Q8TAQ2 1214 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 GLG1Q92896 1179 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 P2RX5Q93086 422 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 RRP36Q96EU6 259 aaKnown RBP9.76□□□□□ -0.85
GPC6-202ENST00000617456 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 PHF7Q9BWX1 381 aaPredicted RBP9.76□□□□□ -0.85
GPC6-202ENST00000617456 TLE6Q9H808 572 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 TUBE1Q9UJT0 475 aa9.76□□□□□ -0.85
GPC6-202ENST00000617456 CCDC69A6NI79 296 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 SH2B2O14492 632 aaPredicted RBP9.75□□□□□ -0.85
GPC6-202ENST00000617456 SLC27A2O14975 620 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 PRC1O43663 620 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 STAG3L1P0CL83 205 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 SP100P23497 879 aaPredicted RBP9.75□□□□□ -0.85
GPC6-202ENST00000617456 MRPS6P82932 125 aaKnown RBP9.75□□□□□ -0.85
GPC6-202ENST00000617456 SIGLEC14Q08ET2 396 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 CBX2Q14781 532 aaPredicted RBP9.75□□□□□ -0.85
GPC6-202ENST00000617456 NAALADL2Q58DX5 795 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 CREB3L3Q68CJ9 461 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 USP17L6PQ6QN14 398 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 ZBTB33Q86T24 672 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 FBXL16Q8N461 479 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 SEPT1Q8WYJ6 367 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 CUL5Q93034 780 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 CDHR1Q96JP9 859 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 APOL5Q9BWW9 433 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 GLT8D2Q9H1C3 349 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 SENP2Q9HC62 589 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 SEC63Q9UGP8 760 aaKnown RBP9.75□□□□□ -0.85
GPC6-202ENST00000617456 LRFN2Q9ULH4 789 aa9.75□□□□□ -0.85
GPC6-202ENST00000617456 USP34Q70CQ2 3546 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 GSTTP1A0A1W2PQM5 241 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 H0Y858 1186 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 hCG_1984214I3L0E3 225 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 M0QZ92 97 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 ATP9AO75110 1047 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 SCG2P13521 617 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 AVPR2P30518 371 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 PAK2Q13177 524 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 MARCH8Q5T0T0 291 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 IER5Q5VY09 327 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 PCNX4Q63HM2 1172 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 SYNE3Q6ZMZ3 975 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 ZNF713Q8N859 430 aaPredicted RBP9.74□□□□□ -0.85
GPC6-202ENST00000617456 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 ASIC4Q96FT7 647 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 TLR9Q9NR96 1032 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 RBM28Q9NW13 759 aaKnown RBP9.74□□□□□ -0.85
GPC6-202ENST00000617456 ERAP1Q9NZ08 941 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 TRPV2Q9Y5S1 764 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 SLC12A7Q9Y666 1083 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 FAM186AA6NE01 2351 aa9.74□□□□□ -0.85
GPC6-202ENST00000617456 MBLAC1A4D2B0 266 aaPredicted RBP9.73□□□□□ -0.85
GPC6-202ENST00000617456 TBKBP1A7MCY6 615 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 MEIS2O14770 477 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 PDGFBP01127 241 aaPredicted RBP9.73□□□□□ -0.85
GPC6-202ENST00000617456 RPLP2P05387 115 aaKnown RBP9.73□□□□□ -0.85
GPC6-202ENST00000617456 INSRRP14616 1297 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 KCNA2P16389 499 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 EXOSC10Q01780 885 aaKnown RBP9.73□□□□□ -0.85
GPC6-202ENST00000617456 DUSP6Q16828 381 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 TMEM266Q2M3C6 531 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 LLGL2Q6P1M3 1020 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 DHX32Q7L7V1 743 aaKnown RBP9.73□□□□□ -0.85
GPC6-202ENST00000617456 VN1R2Q8NFZ6 395 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 TRAPPC12Q8WVT3 735 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 NEK1Q96PY6 1258 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 FTHL17Q9BXU8 183 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 SMARCAD1Q9H4L7 1026 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 TRPC6Q9Y210 931 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 GINS2Q9Y248 185 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 SH3BP1Q9Y3L3 701 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 PCDHB12Q9Y5F1 795 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 TAF6LQ9Y6J9 622 aa9.73□□□□□ -0.85
GPC6-202ENST00000617456 RRN3P2A6NIE6 340 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 CDC45O75419 566 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms