RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CYP26B1Q9NR63 512 aa12.97□□□□□ -0.33
TARDBP-217ENST00000616545 TUBE1Q9UJT0 475 aa12.97□□□□□ -0.33
TARDBP-217ENST00000616545 ODF2LQ9ULJ1 636 aa12.97□□□□□ -0.33
TARDBP-217ENST00000616545 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 RRN3P2A6NIE6 340 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 MAGEB2O15479 319 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
TARDBP-217ENST00000616545 CYP11B2P19099 503 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 ATP4AP20648 1035 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 AFMP43652 599 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 SARSP49591 514 aaKnown RBP12.96□□□□□ -0.33
TARDBP-217ENST00000616545 DPYDQ12882 1025 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 KCNB1Q14721 858 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 TARBP2Q15633 366 aaKnown RBP12.96□□□□□ -0.33
TARDBP-217ENST00000616545 CAMK4Q16566 473 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 RINT1Q6NUQ1 792 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 C1orf186Q6ZWK4 172 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 DDX12PQ92771 950 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 ARMC5Q96C12 935 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 CEP170P1Q96L14 293 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 MTRQ99707 1265 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 MTG1Q9BT17 334 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-217ENST00000616545 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.33
TARDBP-217ENST00000616545 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-217ENST00000616545 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-217ENST00000616545 NRCAMQ92823 1304 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 MYH9P35579 1960 aaKnown RBP12.95□□□□□ -0.34
TARDBP-217ENST00000616545 HAS3O00219 553 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 KRT18P05783 430 aaKnown RBP12.95□□□□□ -0.34
TARDBP-217ENST00000616545 GNAT1P11488 350 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 GAP43P17677 238 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 SCP2P22307 547 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
TARDBP-217ENST00000616545 PSMD2Q13200 908 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 LHX8Q68G74 356 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 CCSAPQ6IQ19 270 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-217ENST00000616545 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 CCDC65Q8IXS2 484 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 SLC17A8Q8NDX2 589 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 LRRC15Q8TF66 581 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 SLC7A3Q8WY07 619 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 DRC1Q96MC2 740 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 SEL1LQ9UBV2 794 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 TELO2Q9Y4R8 837 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 COL4A3BPQ9Y5P4 624 aa12.95□□□□□ -0.34
TARDBP-217ENST00000616545 DOCK5Q9H7D0 1870 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 MYMKA6NI61 221 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 CAVIN2O95810 425 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 PGK1P00558 417 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
TARDBP-217ENST00000616545 MYL3P08590 195 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 ABCD1P33897 745 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 PPP1R2P41236 205 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 RTP1P59025 263 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 ASIC1P78348 528 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 PNOCQ13519 176 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 DHX8Q14562 1220 aaKnown RBP12.94□□□□□ -0.34
TARDBP-217ENST00000616545 MFSD10Q14728 455 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 CT47A1Q5JQC4 288 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-217ENST00000616545 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 RETREG2Q8NC44 543 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 TCP11Q8WWU5 503 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 LENG1Q96BZ8 264 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-217ENST00000616545 DNAJC19Q96DA6 116 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 ZNF333Q96JL9 665 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 DHX33Q9H6R0 707 aaKnown RBP12.94□□□□□ -0.34
TARDBP-217ENST00000616545 ATP6V0A4Q9HBG4 840 aa12.94□□□□□ -0.34
TARDBP-217ENST00000616545 FRMD3A2A2Y4 597 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 ZBTB39O15060 712 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 TBCAO75347 108 aaKnown RBP12.93□□□□□ -0.34
TARDBP-217ENST00000616545 MAFO75444 373 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-217ENST00000616545 RHOBTB3O94955 611 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
TARDBP-217ENST00000616545 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 CCL5P13501 91 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 PSEN2P49810 448 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-217ENST00000616545 ZNF445P59923 1031 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 BEX3Q00994 111 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 PTPN11Q06124 597 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-217ENST00000616545 TBC1D8BQ0IIM8 1120 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 CUL4BQ13620 913 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 GIT2Q14161 759 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 LRRC41Q15345 812 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 ARSHQ5FYA8 562 aa12.93□□□□□ -0.34
TARDBP-217ENST00000616545 TRIM50Q86XT4 487 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms