RNA–Protein interactions for RNA: ENST00000616396.1

AL390964.1-202, humanhuman

TSL 3

Gene AL390964.1, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390964.1-202ENST00000616396 NPTXRO95502 500 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 SNRPB2P08579 225 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 PAMP19021 973 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 HOXC12P31275 282 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 IGFALSP35858 605 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ADCYAP1R1P41586 468 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 MECP2P51608 486 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 EPHB1P54762 984 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ERVK-21P61565 698 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 NKX3-2P78367 333 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 RBM10P98175 930 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 SCRN1Q12765 414 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 DPY19L1Q2PZI1 675 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 LSM12Q3MHD2 195 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 USP39Q53GS9 565 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 HSP90AB2PQ58FF8 381 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 CT47A1Q5JQC4 288 aaPredicted RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 TCTN3Q6NUS6 607 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ZCCHC8Q6NZY4 707 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 USP53Q70EK8 1073 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 NECAB2Q7Z6G3 386 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 CNTD1Q8N815 330 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 WDR66Q8TBY9 1149 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ZCCHC14Q8WYQ9 949 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 SEC14L1Q92503 715 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ZSWIM3Q96MP5 696 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 GNRHR2Q96P88 292 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ADOQ96SZ5 270 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 SMAD5Q99717 465 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 YIPF4Q9BSR8 244 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 RHOBTB2Q9BYZ6 727 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 CDH19Q9H159 772 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 CYP26B1Q9NR63 512 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 SLC5A4Q9NY91 659 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 PPARGC1AQ9UBK2 798 aaKnown RBP3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 TRHDEQ9UKU6 1024 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 ZDHHC9Q9Y397 364 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 PCDHA8Q9Y5H6 950 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 BACE2Q9Y5Z0 518 aa3.34□□□□□ -1.87
AL390964.1-202ENST00000616396 TRBV23OR9-2A0A075B6M9 112 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 LOC102724159A0A0B4J2E5 919 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 K7ESF4 209 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 NOP56O00567 594 aaKnown RBP3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 PLSCR1O15162 318 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 CYP7B1O75881 506 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 ABLIM3O94929 683 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 CNOT4O95628 575 aaKnown RBP3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 ECI1P42126 302 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 SLC6A11P48066 632 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 NEK4P51957 841 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 TMPRSS15P98073 1019 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 PTH1RQ03431 593 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 NFATC3Q12968 1075 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 PWP2Q15269 919 aaKnown RBP3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 INF2Q27J81 1249 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 PIK3R6Q5UE93 754 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 MAMDC2Q7Z304 686 aaPredicted RBP3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 MILR1Q7Z6M3 343 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 CCDC146Q8IYE0 955 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 SMC1BQ8NDV3 1235 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 PCDH19Q8TAB3 1148 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 KCTD13Q8WZ19 329 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 DPF3Q92784 378 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 EXTL1Q92935 676 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 ZG16BQ96DA0 208 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 HOOK2Q96ED9 719 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 MTMR8Q96EF0 704 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 CLIC6Q96NY7 704 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 CRAMP1Q96RY5 1269 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 PHF20Q9BVI0 1012 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 BARX1Q9HBU1 254 aaPredicted RBP3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 ZIM2Q9NZV7 527 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 H2AFY2Q9P0M6 372 aaPredicted RBP3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 MARCH2Q9P0N8 246 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 SAMD15Q9P1V8 674 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 FTSJ1Q9UET6 329 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 COQ6Q9Y2Z9 468 aa3.33□□□□□ -1.88
AL390964.1-202ENST00000616396 TGM5O43548 720 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 EFCAB14O75071 495 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 F2P00734 622 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 LMO1P25800 156 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 IARSP41252 1262 aaKnown RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 KCNJ6P48051 423 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 ATXN1P54253 815 aaKnown RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 RHBDL3P58872 404 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 DGCR2P98153 550 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 PIN1Q13526 163 aaPredicted RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 PPP2R5AQ15172 486 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 ABCB5Q2M3G0 1257 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 CFAP100Q494V2 611 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 RNF219Q5W0B1 726 aaPredicted RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 POMZP3Q6PJE2 187 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 OVCH1Q7RTY7 1134 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 SPATS2Q86XZ4 545 aaKnown RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 WDR75Q8IWA0 830 aaKnown RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 CMIPQ8IY22 773 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 IGSF22Q8N9C0 903 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 TTC8Q8TAM2 541 aa3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 NEU4Q8WWR8 484 aaPredicted RBP3.32□□□□□ -1.88
AL390964.1-202ENST00000616396 VOPP1Q96AW1 172 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms