RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GRIK1P39086 918 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 PPP2R5BQ15173 497 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 FAM47EQ6ZV65 393 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 PALMDQ9NP74 551 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 CCNB2O95067 398 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 MAPK9P45984 424 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 SLFN12LQ6IEE8 588 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 LUZP2Q86TE4 346 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 ACCSQ96QU6 501 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.25
TCF4-248ENST00000616053 UNC45AQ9H3U1 944 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 MCF2P10911 925 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
TCF4-248ENST00000616053 LRG1P02750 347 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 ARHGEF3Q9NR81 526 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 HSD3B2P26439 372 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 TIMM10P62072 90 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 CBFBQ13951 182 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
TCF4-248ENST00000616053 ERBB3P21860 1342 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 KCNA2P16389 499 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 CENPSQ8N2Z9 138 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 DNAJC1Q96KC8 554 aaKnown RBP13.51□□□□□ -0.25
TCF4-248ENST00000616053 FHDC1Q9C0D6 1143 aaPredicted RBP13.51□□□□□ -0.25
TCF4-248ENST00000616053 CARD9Q9H257 536 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
TCF4-248ENST00000616053 BRAFP15056 766 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 SDSP20132 328 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 AMPD2Q01433 879 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 VN1R5Q7Z5H4 357 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 RTKN2Q8IZC4 609 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 UCMAQ8WVF2 138 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 REXO4Q9GZR2 422 aaKnown RBP13.51□□□□□ -0.25
TCF4-248ENST00000616053 APPL1Q9UKG1 709 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 PPP6R2O75170 966 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 HDDC2Q7Z4H3 204 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
TCF4-248ENST00000616053 PLCL1Q15111 1095 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 ESRP1Q6NXG1 681 aaKnown RBP13.5□□□□□ -0.25
TCF4-248ENST00000616053 PPP1R2P3Q6NXS1 205 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 COMMD2Q86X83 199 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 USE1Q9NZ43 259 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 IL9RQ01113 521 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 POU5F1BQ06416 359 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 CATSPER3Q86XQ3 398 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 SYTL1Q8IYJ3 562 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 TMED2Q15363 201 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 TTLL6Q8N841 843 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 HSPA4LO95757 839 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
TCF4-248ENST00000616053 CCDC142Q17RM4 750 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 SPDYAQ5MJ70 313 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 RUNDC3BQ96NL0 473 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 DNAJC17Q9NVM6 304 aaKnown RBP13.5□□□□□ -0.25
TCF4-248ENST00000616053 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25
TCF4-248ENST00000616053 ATAD2BQ9ULI0 1458 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 CCDC130P13994 396 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 OCA2Q04671 838 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 PHKA2P46019 1235 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 ZNF614Q8N883 585 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 MUC3BQ9H195 1237 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 MRPL47Q9HD33 250 aaKnown RBP13.5□□□□□ -0.25
TCF4-248ENST00000616053 CFAP65Q6ZU64 1925 aaKnown RBP13.5□□□□□ -0.25
TCF4-248ENST00000616053 TOMM70O94826 608 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 TUBB2AQ13885 445 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 RGL4Q8IZJ4 473 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 TUBB2BQ9BVA1 445 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 ATP6V1HQ9UI12 483 aa13.5□□□□□ -0.25
TCF4-248ENST00000616053 STKLD1Q8NE28 680 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 IQCDQ96DY2 449 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 MMP19Q99542 508 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 TMEM245Q9H330 911 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 ANAPC2Q9UJX6 822 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 EYA2O00167 538 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 GDF11O95390 407 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 APBA1Q02410 837 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 ADAM9Q13443 819 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 CCDC3Q9BQI4 270 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 MSTO1Q9BUK6 570 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 ZFYVE28Q9HCC9 887 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 SNX6Q9UNH7 406 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 AGRPO00253 132 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 PJA2O43164 708 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 MT-ND3P03897 115 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms