RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 COG1Q8WTW3 980 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 HNRNPLLQ8WVV9 542 aaKnown RBP15.24■□□□□ 0.03
SSBP2-220ENST00000615665 PNKPQ96T60 521 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 PARP2Q9UGN5 583 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 PACSIN2Q9UNF0 486 aaPredicted RBP15.24■□□□□ 0.03
SSBP2-220ENST00000615665 A0A1W2PRG0 241 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 DDTLA6NHG4 134 aaPredicted RBP15.23■□□□□ 0.03
SSBP2-220ENST00000615665 MED24O75448 989 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 ACTN1P12814 892 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 PLA2G4AP47712 749 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 EPHA7Q15375 998 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 SEPT9Q9UHD8 586 aaPredicted RBP15.23■□□□□ 0.03
SSBP2-220ENST00000615665 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 SLC16A3O15427 465 aaKnown RBP15.23■□□□□ 0.03
SSBP2-220ENST00000615665 PEX3P56589 373 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 CDK17Q00537 523 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 NPY5RQ15761 445 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 MOXD1Q6UVY6 613 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 ANKS4BQ8N8V4 417 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 ATP2A1O14983 1001 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 HNRNPH2P55795 449 aaKnown RBP15.23■□□□□ 0.03
SSBP2-220ENST00000615665 TRPC3Q13507 836 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 STYK1Q6J9G0 422 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 LRRC1Q9BTT6 524 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 FAM114A2Q9NRY5 505 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 DUSP10Q9Y6W6 482 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 COL18A1P39060 1754 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 UCHL3P15374 230 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 GGCXP38435 758 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 POLGP54098 1239 aaPredicted RBP15.23■□□□□ 0.03
SSBP2-220ENST00000615665 MTMR9Q96QG7 549 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 AZI2Q9H6S1 392 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 RAVER2Q9HCJ3 691 aaKnown RBP15.23■□□□□ 0.03
SSBP2-220ENST00000615665 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
SSBP2-220ENST00000615665 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 GOLGA8IPA6NC78 632 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 GOLGA8JA6NMD2 632 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 P4HBP07237 508 aaKnown RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 DRAP1Q14919 205 aaPredicted RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 TTC31Q49AM3 519 aaPredicted RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 MSANTD4Q8NCY6 345 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 NOP56O00567 594 aaKnown RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 NF2P35240 595 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 TTC19Q6DKK2 380 aaPredicted RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 PRPF38AQ8NAV1 312 aaKnown RBP15.22■□□□□ 0.03
SSBP2-220ENST00000615665 FUT8Q9BYC5 575 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 DNAI2Q9GZS0 605 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 PLCB1Q9NQ66 1216 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 GRID2IPA4D2P6 1211 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 E7EVH7 732 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 CCDC188H7C350 402 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 SLC9A1P19634 815 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 RNF207Q6ZRF8 634 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 XXYLT1Q8NBI6 393 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 MAIP1Q8WWC4 291 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 ZNF653Q96CK0 615 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 MTRQ99707 1265 aa15.22■□□□□ 0.03
SSBP2-220ENST00000615665 LRRIQ4A6NIV6 560 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 MSH4O15457 936 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 CCND2P30279 289 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 PBX1P40424 430 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 SYN2Q92777 582 aaPredicted RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 RMDN3Q96TC7 470 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 INTS2Q9H0H0 1204 aaKnown RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 TBC1D22BQ9NU19 505 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 CRY2Q49AN0 593 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 TMEM119Q4V9L6 283 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 ANKRD35Q8N283 1001 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 SUGCTQ9HAC7 445 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 KCNK9Q9NPC2 374 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 COL1A1P02452 1464 aaPredicted RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 HIP1RO75146 1068 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 GAS8O95995 478 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 INPP5BP32019 993 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 QARSP47897 775 aaKnown RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 GCLMP48507 274 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 DPH6Q7L8W6 267 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 FAM151AQ8WW52 585 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 PPANQ9NQ55 473 aaKnown RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 ARHGAP20Q9P2F6 1191 aa15.21■□□□□ 0.03
SSBP2-220ENST00000615665 ZNF70Q9UC06 446 aaPredicted RBP15.21■□□□□ 0.03
SSBP2-220ENST00000615665 A0A0U1RQJ8 604 aa15.21■□□□□ 0.02
SSBP2-220ENST00000615665 ESYT3A0FGR9 886 aa15.21■□□□□ 0.02
SSBP2-220ENST00000615665 PAPD7Q5XG87 772 aaKnown RBP15.21■□□□□ 0.02
SSBP2-220ENST00000615665 VCPKMTQ9H867 229 aa15.21■□□□□ 0.02
SSBP2-220ENST00000615665 SREBF1P36956 1147 aa15.2■□□□□ 0.02
SSBP2-220ENST00000615665 JAK3P52333 1124 aa15.2■□□□□ 0.02
SSBP2-220ENST00000615665 NNTQ13423 1086 aa15.2■□□□□ 0.02
SSBP2-220ENST00000615665 BEND6Q5SZJ8 279 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms